Rathayibacter toxicus WAC3373: APU90_10250
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Entry
APU90_10250 CDS
T04269
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc03030
DNA replication
rtc03410
Base excision repair
rtc03420
Nucleotide excision repair
rtc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APU90_10250
03410 Base excision repair
APU90_10250
03420 Nucleotide excision repair
APU90_10250
03440 Homologous recombination
APU90_10250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtc03032
]
APU90_10250
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_10250
Enzymes [BR:
rtc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APU90_10250
DNA replication proteins [BR:
rtc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
APU90_10250
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
APU90_10250
NER (nucleotide excision repair)
GGR (global genome repair) factors
APU90_10250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ALS58097
UniProt:
A0A0C5BSR1
LinkDB
All DBs
Position
2247360..2250029
Genome browser
AA seq
889 aa
AA seq
DB search
MSDPEQPTLLLVDGHSLAFRAFYALPVESFQTREGQHTNAIHGFLSMLILLVKNEKPTHL
AVAFDISRYSFRTREYPDYKGTRGETPPEFKGQVPLLEEALHAMNIRTLAKEDFEADDIL
ATLARQGEDAGFRVLVVSGDRDAIQLITPQVTLLYPSTQGVSQLTRYDRDKVFEKYGVEP
HQYPEIAALVGETSDNLPGVDKVGPKTAAKWVNQYGTVADIVAHADDIKGVVGEKLREQK
ENALRNRRLNRLVTTVELSLGPADLGRQPINPDAVREVFTRLEFKTLQQRVLTIAAEEGV
EGAVSVLAGDTVTTAAPATSTMVDEELEHWLDRVSAKGTAPVAVQVQLGAVGVEGIGLSV
QKESVFVPWAVGRPDYTALEQWLASDAPKYFADAKPQIKALRGVGMTVAGLAFDTRLAAW
LLQPTGHAATVSAQVSQYLDETVVQGDPNQLVPLAEPLGSATEAWYVFRLVSVLTELLGD
EMLSVLVDIELPIVQVLATMELTGVAIDTEILMHLRGELTTAAAELARRAFAEIGHEINL
GSPKQLQQVLFDELAMPKTRATKTGYTTDASALIDLQELHPHPFLGLLLEHRDATKLKQI
IETLEKSVADDGRIHTSYDQTGTATGRISSNDPNLQNIPIRSDVGRRIRTAFVHSEGAST
LLTADYSQIEMRIMAHLSGDTGLIEAFHSGEDLHRFVGARIFRVEPTEVTSAMRNKVKAM
SYGLAYGLSAFGLSKQLRISSAEAKQLMTDYFVRFGGVRDYLRGVVEQARKTGYTETIFG
RRRPFPELTSANRVLRDNAERAALNSPIQGSAADIMKLAMIGVHSDIEKHGLGSRMLLQV
HDELIFDAAPGEEEALEGIVRQRMAGAAELRVPLEVQVGHGPHWDAAGH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatccggaacagcctaccctcctgcttgtcgacggccattccctggcttttcgg
gcgttctacgctctcccggtagagagttttcagacccgcgagggtcagcatacgaatgcg
atccacggctttttgtcgatgcttatcctgctagtgaagaatgagaagcccacgcacctc
gccgtcgcgttcgatatttctcgctactctttccgcacccgcgaatatcccgactacaag
gggacccgtggcgagactccgcccgaattcaagggtcaagtgccccttctcgaggaggcg
ctgcatgcgatgaatatccgtactctggccaaagaggatttcgaggcagatgatattctc
gccactctcgcccgccaaggcgaggacgcaggttttcgcgttctcgttgtctcgggtgac
cgcgacgcgatccagctgattaccccccaggtcaccctgctctacccctcgacccagggt
gtctcgcagctcacccgatacgaccgcgacaaagtcttcgagaagtacggggtcgagccg
caccaataccctgagatcgcggcgcttgtcggtgagacgagcgataatttgcccggagtc
gataaagtcggccccaaaacggcggccaaatgggtcaatcagtacgggacagtagccgat
attgtcgcgcatgccgacgacattaagggagtagtcggcgagaagctgcgcgagcaaaaa
gagaacgcgcttcgcaaccgtcggcttaaccgtctcgtcaccaccgtcgagctgtcgctc
ggtcccgccgatctcgggcgccaacccattaaccccgatgccgtccgtgaggtcttcacc
cgtcttgaattcaagacattgcaacagcgggtactcacaatcgccgccgaggagggcgtt
gagggcgccgtgagcgtcctggcgggcgacactgtgacgaccgccgcacccgctaccagc
acgatggtggacgaagaactcgagcattggctcgatcgcgtgtcagcgaagggcacagct
ccggttgccgttcaggtgcaactcggcgcggtcggcgtcgaaggtatcggcctgtcggtc
cagaaggaatcggtcttcgttccgtgggcggtaggccgccccgactacacggcgctcgag
cagtggctggcaagcgacgcgcccaaatacttcgctgacgcaaaaccgcagatcaaggct
ttgcgtggcgttggtatgactgttgcgggcctggcgttcgacacccgtcttgctgcctgg
ctccttcagccgaccggccacgctgcgaccgtgagtgcgcaggtgtcgcagtacctcgac
gagacagtggtgcagggcgacccgaaccagcttgttcccctcgccgagcctctggggtcg
gccaccgaggcctggtatgtatttcgactcgtgagcgtgctgaccgagctgctgggcgac
gagatgctctcggtgttggtcgatatcgaactccccattgtccaggtgctcgcgacgatg
gagctgaccggagtcgcgatagataccgaaattctgatgcaccttcgcggcgaattgacc
acggcggcggccgagctggcacgtcgcgcctttgccgagatcgggcacgaaataaatctc
ggctctcctaagcagttgcagcaggttctcttcgacgaactggctatgcccaagacccgc
gcgactaagaccggctatacgactgacgcctccgccctgatcgacctgcaggaattgcat
ccccatccttttctcggtctgttgctcgagcaccgcgatgcgaccaagctcaagcaaatt
attgagaccctcgaaaagtccgtggctgatgatggccggatccacaccagctacgaccag
accggcacggcgactggccgcatttcctcgaacgaccccaaccttcaaaacattccgatc
cgaagcgatgtgggccgccgtatccgtaccgcttttgtgcacagtgagggggcgagtaca
ttattgaccgctgattactcgcagattgaaatgcggattatggcgcacctttctggtgat
acgggactcatcgaggcattccacagtggcgaggatttgcatcgctttgtcggcgcgcgg
attttccgcgtcgaaccgacagaggtgacctcagcgatgcgcaataaggtcaaggcgatg
tcgtatgggcttgcatatgggctcagtgccttcggcctgtccaagcaattgcgcatctcg
agcgccgaggccaagcagctgatgaccgactactttgtgcgcttcggaggggtgcgtgat
tatctccgcggcgtcgtcgagcaggcgcgaaagaccggttacaccgaaaccattttcggc
aggcgtcgcccgttccccgaactcaccagcgccaatcgtgtgcttcgtgataacgcggag
cgcgccgcccttaattcgccgatccaaggttctgccgccgacatcatgaagctcgccatg
atcggcgtgcactccgatatcgagaaacacgggctcggctcccggatgctgctgcaggta
cacgacgagttaatcttcgacgccgctcccggcgaggaagaggcgctcgaaggcattgtc
cgtcagcgaatggctggcgcagccgagctgcgtgtcccgctcgaggtgcaggtcggccac
ggtccgcactgggatgcggccgggcactga
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