Rathayibacter toxicus WAC3373: APU90_10275
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Entry
APU90_10275 CDS
T04269
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APU90_10275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_10275
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APU90_10275
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APU90_10275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_25
AAA_22
nSTAND3
DnaJ_CXXCXGXG
NACHT
ATPase
NB-ARC
MeaB
Viral_helicase1
NTPase_1
KORA
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALS58102
UniProt:
A0A0U1PSM9
LinkDB
All DBs
Position
2256438..2259323
Genome browser
AA seq
961 aa
AA seq
DB search
MPSASSRRCVSALDESVSKLVVSGARVHNLRDLDLEIPRDALVVFTGLSGSGKSSLAFDT
IFAEGQRRYVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEI
FDYMRLLWARIGVPHCPVCDERISAQTVQNIADQLMELEPGTRYQILSPVVSRKKGEFVD
LFTELTAAGYSRALVDGTLIQLSDPPPLAKQVKHDISVVVDRLVAGADILGRLTDSLETA
LRLTDGVVQINCLDAEGDAAWSTFSEKLSCPNNHPLSLTEIEPRTFSFNAPFGACPECSG
LGTRMSVDDDLLLGDPDLSIAEGVIIPWTTQGKGLFQYYEKLLDGLARDLGFSLSTPWKR
LSTEVQQAVLHGDNFEVKVKWKNRYGRQMSYNSGFEGVVPYIERQYIQSETDAQRSRWAE
YLREVPCPVCKGSRLKPEVLAVRVHGASIADVADLSLGEAQEFMARLELTEREAQIAAQV
LREIRARLDFLLEVGLSYLTLARAAASLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGL
HQRDNRRLIDTLVRLRDLGNTLIVVEHDEDTIRAADWLVDIGPGAGVNGGTVVHSGSYES
LLDNTHSLTGDYLSGRRSIDVPTRRRSVDRTRMITVVGAQANNLRKIDAEFPLGTFVAVT
GVSGSGKSTLVNDILYRVLANQLNGARKVPGRHTRVTGLETLDKVVHVDQNPIGRTPRSN
PATYTGVFDRIRTLFAETTEAKVRGYLPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVY
VACDVCGGARYNRDTLTVHYKGKNIAEVLDMPIAEAAEFFEPITAIHRFMKTLVDVGLGY
VRLGQSATTLSGGEAQRVKLATELQRRSNGRSVYVLDEPTTGLHFEDVRKLLLVLNSLVD
KGNTVITIEHNLDVIKSADWLIDMGPEGGAGGGQIIAVGTPEQVAQVPGSHTGTFLADIL
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtctgcctcctcccgccgctgtgtctccgccctcgacgagtcggtctcaaagctg
gtggtgagtggtgcgcgagtgcataatctgcgcgatctcgatctagaaatcccgcgcgac
gcgctcgttgttttcaccgggctttctggctctggtaaatcgtcactcgccttcgacacg
atctttgcggagggtcagcgtcgctatgtggagtcgctttctgcctatgcgcgtcagttt
ctcggccaggtggatcggcccgatgtggacttcattgagggtctgagcccggcggtctcc
attgatcaaaaatccactaaccgcaacccgcgctcgacagtcgggactattaccgagatc
ttcgattacatgcgtctgctctgggcgcgcatcggtgtgccacactgtcccgtttgcgat
gagcgaatttcggcgcagacagtacagaacattgccgatcagctgatggaacttgagccg
ggcacccgctaccagatccttagcccggtcgtctcgcgcaaaaaaggcgagttcgtcgat
ctcttcacggagttgacggccgccggttattcgcgcgcactggttgatggcacgctcatt
caactgtccgacccgcctcctctcgccaagcaggtgaagcatgatatctcggtggtcgtg
gatcggctcgtcgccggcgccgatattcttggtcggcttaccgactcgcttgagacggca
ctgcgactgacggacggtgtggtccagatcaactgtctagacgctgagggcgatgccgcg
tggagcactttttcggaaaagctttcctgccccaacaatcatcctctctcgctcacagaa
attgaaccgcgtacgttctcgttcaatgccccgttcggtgcctgcccggaatgctccggt
ctgggcactcgcatgtcggttgatgacgatttgctattgggtgaccccgatctcagcatt
gctgagggtgtgattattccatggaccacacagggaaagggcctttttcagtattacgaa
aagctgctggacggccttgcccgcgatctcggcttttcgctctccacgccatggaaacgg
cttagcaccgaggtgcagcaggcggtgctgcacggtgacaatttcgaggtcaaggttaag
tggaagaaccgttacggccgccagatgagctacaattcgggtttcgagggcgttgttccg
tatatcgagcgtcaatacattcagtccgagaccgatgcacagcgcagtcgctgggccgag
tatctgcgtgaggtgccctgtccggtctgcaagggttcccgtctcaaacctgaggtgctg
gctgtgcgggtacacggcgcgagcatcgccgatgttgccgacctcagccttggcgaagcg
caggagtttatggctcggctcgaactcaccgagcgggaggctcagatcgccgctcaggtc
ctccgagaaattcgcgcgcgcctcgactttcttctcgaggtcggtctgtcctatctcacg
ctcgcgcgcgcggcggcctcgctctccggcggggaggctcagcgcattcgactggccacc
cagatcggatcggggcttactggcgtgctgtatgtcctcgacgagccgagcatcggcttg
caccaacgcgacaatcgtcgtctcattgacacccttgtgagactgcgtgacctcggcaat
accctgatcgttgtcgaacatgacgaggacaccattcgtgccgctgactggctcgttgat
atcggcccgggtgctggcgtcaacggcggtacggtcgtgcactccggttcttacgagtca
ctactcgataacactcactcgctcaccggtgattacctttccggtcgacgatcaatcgat
gtgcccacacggcggcgctcggtcgatcgcacacggatgatcaccgtggtgggtgctcag
gctaacaatctccgtaaaattgatgctgaattccccctcggtacttttgttgctgtgacg
ggtgtatcgggatccggtaaaagcacgctggtcaatgacatcctctatcgcgtacttgct
aaccaactcaatggtgctcgaaaggttcctggtaggcacacccgagtgaccggtctagaa
actcttgacaaggtcgttcatgtggatcaaaaccctattggccgcaccccgcgctccaac
ccggcaacctataccggggtttttgatcggatccgtacgctctttgccgagacgacggag
gcaaaggtacgtggatatttaccgggtcggtttagttttaatgtcaagggcggccgctgt
gaggcctgttctggtgacggtaccctcaagatcgagatgaatttcttgcccgatgtctat
gtcgcgtgtgacgtctgtgggggagcccgctacaaccgggacacacttactgtgcactac
aagggaaagaacatcgctgaagttcttgacatgccgatcgcagaagctgctgaattcttc
gaaccgattacggcaattcatcgttttatgaagactctggtcgatgtgggtctcggctac
gtccgactgggacaaagtgccaccactctctccggaggcgaagcgcagcgtgtcaagctc
gccactgagcttcaacgccgttctaacgggcgtagcgtttatgttcttgatgagccgacg
accggtttgcacttcgaggatgtgcgtaagctgttgctggtcttgaatagcctggtcgat
aagggcaatactgttatcaccattgagcacaatctcgatgtgattaaatctgcggactgg
ttgattgatatgggtcctgagggtggcgcgggcggtggtcagattatcgccgtgggtact
ccggagcaggtggcacaagtcccgggtagtcatacggggaccttcctcgccgacatcctc
ggttga
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