Rissa tridactyla (black-legged kittiwake): 128900180
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Entry
128900180 CDS
T09443
Symbol
YOD1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128900180 (YOD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128900180 (YOD1)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C88
128900180 (YOD1)
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GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
Zf-C2H2_ZNF451_5th
zf-C2H2_2
Fn_bind
Motif
Other DBs
NCBI-GeneID:
128900180
NCBI-ProteinID:
XP_054036956
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Position
21:complement(5423854..5428789)
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AA seq
304 aa
AA seq
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MLRLRCKARSGTHPLPGLTAHSRLRDMQAALAALTGVPAPAQRLLLGFPPRSLDLSDGER
RLGDLGIHSGDTLIVEEDTSKPKTDSPVVAKRTMSNSMREVAPVLVRRVVPADNSCLFTS
VYYVVEGGVYDPGCAPEMRSLIAQIVASDPDSYCEAVLGKTNREYCDWIRREETWGGAIE
VSILSKFYQCEICVVDTQTVRIDRFGEDASYTKRVLLIYDGIHYDPLERKIPDSDIPPQT
IFSTTDDIVLAQALELADEARRKRQFTDVNRFTLRCMVCQKGLTGQVEAREHAKETGHTN
FGEV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctgcgctgcaaggcccggagcggcacccaccccctgcccggcctcacggcc
cactcccgcctccgggacatgcaggccgcgctggccgccctcaccggcgtccccgccccg
gcccagcgcctcctgctcggtttcccgccgcggagcctggacctcagcgacggcgagcgc
cggctcggcgacctcggcatccactcgggtgatactctgattgtcgaagaggatacatcc
aaacccaagactgactcacctgttgttgcaaaaagaacaatgtcaaactccatgagggaa
gtggcaccggtgcttgtgaggagggttgtcccggcggataactcctgtctcttcaccagc
gtgtactacgtggtggagggaggtgtttacgacccgggttgtgccccagagatgcgcagc
cttatagcccagatagtagcaagtgatcctgattcttactgtgaggcagttctagggaaa
actaacagggagtattgcgactggatcagacgagaagagacttggggaggagccatcgaa
gtgtccattttatccaaattttaccagtgcgaaatctgtgtggtggacacacagacggtc
agaatcgaccgttttggggaagatgccagttacactaagcgggtccttttaatttacgat
ggaattcattacgatccacttgagcgtaaaatccccgactcggacattcctccccagacc
attttctccacaactgatgatattgttcttgcgcaagcgttggagttggcggatgaagcc
agacggaagaggcagtttaccgacgtgaatcgctttacgctgaggtgcatggtgtgccag
aagggactaactggacaagtggaagccagagaacacgccaaggagactggacacaccaac
ttcggagaagtgtga
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