Rissa tridactyla (black-legged kittiwake): 128900228
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Entry
128900228 CDS
T09443
Symbol
SNRPE
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128900228 (SNRPE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128900228 (SNRPE)
03041 Spliceosome [BR:
rtd03041
]
128900228 (SNRPE)
03032 DNA replication proteins [BR:
rtd03032
]
128900228 (SNRPE)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128900228 (SNRPE)
Spliceosome [BR:
rtd03041
]
Complex A
U1 snRNP components
Sm proteins
128900228 (SNRPE)
U2 snRNP components
128900228 (SNRPE)
Complex B
U1 snRNP components
128900228 (SNRPE)
U4/U6.U5 tri-snRNP components
128900228 (SNRPE)
Complex C
U2 snRNP components
128900228 (SNRPE)
DNA replication proteins [BR:
rtd03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128900228 (SNRPE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
128900228
NCBI-ProteinID:
XP_054037067
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All DBs
Position
21:4139656..4142027
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AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgcgggcagggccagaaggtgcagaaggtgatggtgcagcccatcaacctc
attttccgctacctgcagaacaggtccaggatccaggtgtggctctatgagcaagtgaac
atgcggatagaaggctgcattatcggctttgatgaatatatgaacttggtgctggacgac
gcagaggaaattcactccaaaacaaaatcaaggaaacagctgggtcgcatcatgttaaaa
ggggacaatatcactcttctacaaagtgtttctaactag
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