Rissa tridactyla (black-legged kittiwake): 128900232
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Entry
128900232 CDS
T09443
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128900232 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128900232 (IRF6)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128900232 (IRF6)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128900232 (IRF6)
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
128900232
NCBI-ProteinID:
XP_054037079
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Position
21:complement(6192229..6200528)
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AA seq
460 aa
AA seq
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MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEDNTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPGSTGSAPWDEKDNDLDEEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCS
PEAVWPKNEPLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNERQKVFTSRLLDVMDRGLILEV
SGHAIYAVRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQ
PPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQNHQEGWPMQAPAMHMAQPLPAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcacccgcgaagagttcgcttgaagccatggctggtagcccaggtagatagc
ggtatgtatcccggccttatctggctgaaccgagaagccaagcggtttcagatcccctgg
aagcacgcaactcggcacagcccgcagcacgaggaggacaacaccatcttcaaggcttgg
gctgtggaaacgggaaagtaccaggaaggagtcgatgagccagaccctgcaaagtggaaa
gcccagctccgatgtgctcttaacaaaagccgggaatttaatttgatatatgatggcacc
aaggaggtgcccatgaatcctattaaaatttatgaagtgtgcgatatcccgcagtcccag
ggatcaatcattaatccaggttccactggctcagctccatgggatgaaaaggataatgat
cttgatgaggaagaagaggaagaactgaatcaatctcagcatgtccctattcaagagaca
tttccatttcttaatatcaatgattctccaatggctccagccagtgcagaaaactgcagc
cctgaagctgtgtggccaaagaatgaacctctagatatggaaatgcccccaactgcgctg
cagcatgacttcttcagcagccctgagctctggatcagctctctgccaatgacagaccta
gaaatcaagtttgaatatcgaggaaaggagactggaccaacgacgactgtaagcaacccg
cagggatgcagacttttctacggagagctgggtcctatgccagaccaggaagagctattt
gggcctattagtttggagcaagtaaagtttccaggaacagagcaaatcaccaatgaaagg
cagaaggtcttcacaagtcggctgctggatgttatggacaggggactgatcctggaggtc
agcggccatgccatctacgctgtccggctctgccagtgtaaggtgtactggtctggtccc
tgtgcgccttcctctaccacaccaaatttgatcgagaggcaaaagaaagtcaaactcttc
tgtctggaaacattcctaagcgagctcattgcccatcagaaaggacaaattgagaaacag
ccaccatatgagatctacttctgttttggagaagaatggcctgatggaaaacccagggag
aggaagctgattgtggttcaggtcattccagttgtggcccggatgatctacgaaatgttt
tccggtgacttcacgcgctcctttgacagcggcagtgtgcggctccagatctctacgccc
gacatcaaggacaacatcgtggcccacctgaagcagctgtatcgcctgctgcagaaccac
caggaggggtggcccatgcaggcccccgccatgcacatggcccagccgctccccgcacag
tga
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