KEGG   Rissa tridactyla (black-legged kittiwake): 128900432
Entry
128900432         CDS       T09443                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27 isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128900432 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rtd03041]
    128900432 (BCAS2)
   03400 DNA repair and recombination proteins [BR:rtd03400]
    128900432 (BCAS2)
Spliceosome [BR:rtd03041]
 Complex B
  Other components
   Prp19 complex
    128900432 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    128900432 (BCAS2)
DNA repair and recombination proteins [BR:rtd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    128900432 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 EzrA INO80F CCDC113_CCDC96_CC Tup_N GAS SCRG1 DUF3450 Phlebovirus_NSM PRKG1_interact
Other DBs
NCBI-GeneID: 128900432
NCBI-ProteinID: XP_054037533
LinkDB
Position
21:complement(7249086..7252743)
AA seq 226 aa
MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVHNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDFQ
NT seq 681 nt   +upstreamnt  +downstreamnt
atggcgggcccggggctggtggccggcgacgtggtggtggacgcgctgccctacttcgac
cagggctacgaggcgccgggagtccgtgaggcggccgcggcgctggtggaggaggagacg
cggcggtaccggccgacgaagaactacctcagttacctgccggcgcacgactacagcgcc
tttgagaccgagatcatgcggaacgagttcgagcgcctggcggcccggcagcccctcgag
ctgctcagcatgaaaaggtacgagctgccggccccgtcctccggacagaagaacgatatc
acggcgtggcaggagtgtgtgaacaactccatggcgcagctggagcaccaggcggtccgc
atcgagaacctggagttaatgtcgcaacacggctgtaatgcttggaaggtgcacaacgag
catctggttcatatgatagaacaagcccagaaagagcttcagaagttaaggaaaaacatt
caagatctgaactggcaacgaaagaacatgcagctcacagctggggctaagctacgagaa
atggaatctacatgggtctctcttgtcagtaaaaattatgagattgaacgaactattgtg
cagctagaaaatgaaatttcacaaatcaaacagcagcatggagaagcaaacaaggagaac
atccagcaagacttccagtga

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