KEGG   Rissa tridactyla (black-legged kittiwake): 128900504
Entry
128900504         CDS       T09443                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtd03036]
    128900504 (KDM4B)
Enzymes [BR:rtd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128900504 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128900504 (KDM4B)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128900504 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 128900504
NCBI-ProteinID: XP_054037681
LinkDB
Position
22:327961..421249
AA seq 1110 aa
MGSEQNPGCKIMTFRPTLEEFRDFGKYIAYMESQGAHRAGLAKVIPPKEWKPRKTYDDID
DMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLERKYWK
NLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFGMWKT
TFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMT
LISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMA
TQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDITVLDHMKPTALTSPELDAWNETKAE
LKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEELKRG
PDLEEEERSKVIEGEGDCKVKARPPKVKGERKKKHLFHQHQHHLQAPQPPLPQQQPPLPP
PPQQQPAEDEAPAARPPVPPAGPTSSTAEKSLPPAPLNIVQPSEAPVEEDDFKPRPIIPM
LYVVPRTKKVVFDKERMSCQQAFEQFATQKSPSWQEETVPVEVSVKEEENAEAENTEVAA
EVSDLQTASAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDP
EALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQMDKEAAPVSAG
ETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHA
SCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWIHIICAIAVPEARF
LNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVP
MEPDDWPYVVSITCFKHKAANQNIPFRREVTLGQTVITKNRNGLYYRCKVIGMTTQTFYE
VNFDDGSYSDNVYPESIISRDCIQMGPPPEGELVQLQWTDGIVYKAKFIAAQISQIYQVE
FEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNSRNP
EEYGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3333 nt   +upstreamnt  +downstreamnt
atggggtcggagcagaaccctggctgtaagatcatgacctttcgtcccacccttgaggag
tttcgggactttggcaagtacatcgcttacatggaatcgcaaggagctcaccgagcaggg
cttgccaaggtgattcctcccaaggaatggaagccccgaaaaacctatgacgacatagat
gacatggttatcccagctcccattcagcaggtggttactggacagtcgggattattcacc
cagtataatatacagaagaaacccatgactgtgggagaataccggcggctggctaacagt
gagaagtattgtactccacgccatcaagattttgaagacttggaacgcaagtactggaag
aatctcacatttgtctcgccaatttatggggctgatatcagtggctcgctatatgatgca
gatgtggaagaatggaatattggcaatctgaacaccctcttagacatggtggaacatgag
tgtggcattatcatagaaggcgtaaacactccctacctctactttgggatgtggaagaca
acatttgcctggcacacagaggacatggatctctacagtatcaactacttgcactttggg
gagccaaagtcctggtatgccatacctccggaacacggcaagaggctggaacgcctggcc
aaaggattttttccaggaagctctcagggatgtgatgctttcctccgtcacaagatgacc
ctcatttcaccctcgatcttgaagaagtacggcattccttttgaccggatcacccaagaa
gctggagagttcatgattacgtttccttatggttaccacgctggcttcaatcatggcttc
aactgtgctgagtcgaccaactttgccactttgcgatggattgactatggaaaaatggca
acgcagtgtacttgccgcaaggacatggtgaagatttccatggatgtctttgtgagggtt
ctgcaaccagaacgttacgatttatggaaacaaggaaaagacattactgtcctggaccat
atgaaacctacagccctgactagtccagaactagatgcctggaatgagacaaaggcagag
ttgaaggctaaattgcttcgcaggataggagatgaggaagaggacaacaaacaccggtct
cacagaaaaaggagtcagcccagaagacataaaacagaggatcagaagtctctcggggat
gtcatggctatcgaaactgccttggaagacgtgaaagtaaaagaggagctgaaaagaggc
ccagatctggaggaagaggagagaagcaaagtgattgagggagaaggtgactgcaaagtg
aaggcccgtcctccgaaagtcaaaggcgagaggaagaaaaagcacctcttccatcaacac
cagcaccacctgcaggcacctcagccccctctgccgcagcagcagccacccctgccaccg
ccgccccagcagcagccggcagaggacgaggcaccagcggcacggccaccggtaccccca
gcaggacccacatcgtccacggcagaaaagagcttgcccccagctcccctgaacattgtc
cagccctcggaggcgccagtggaggaagatgactttaaaccccggcccatcattcccatg
ctttacgtggttccacggaccaaaaaggtggtgtttgacaaggagcgcatgtcctgccag
caggcgtttgagcagtttgccacgcagaagagtccaagctggcaggaggagacggtccct
gtggaagtctctgtgaaggaggaggagaatgcagaagcagaaaatacagaggtcgctgca
gaggtcagtgatttacagactgcttctgctttttcaaaaatgaagatggagataaaaaag
agtcgtcgtcatccactgggcaaaccaccaacgcgctccccgttgtcagtggttaaacag
gagacctcgagcgatgaggaaacatttccattttctggggaggaagatatgagtgaccca
gaggctttgaaatctttactttccctccagtggaagaataaagcacacaatttcccagct
gaaagaaaattcaatgcagctgctgccctgagtgagccatactgtgctgtctgcaccctc
ttctacccctacaaccagtctttacagatggataaagaagctgccccagtctctgcaggg
gagaccacctctttcgtccacctttcaaagtgcggacaaaagaccaagcctctgatcccg
gagatgtgctttacctcaagtggagaaaacacagagccccttccttcaaattcatatatt
ggagaggatggaaccagtcccttgatatcctgtgccaaatgctgtctgcaggttcatgcc
agctgttacggaatacgtccagatttggtgaatgaaagttggtcttgctcacggtgctca
gccaacgcgtgggcagcggaatgttgcctctgtaatctcaggggaggagctcttcagatg
accactgatgggcggtggatccatataatctgtgctattgctgtgcccgaggcccgtttt
ctcaatgtaatagagcgtcatcctgtggatatcagcgctattccggagcagagatggaaa
ctgaaatgcgtgtactgtcggaagcggatgaagaaggtgtccggtgcctgcatccagtgc
tcctacgagcactgctccacctccttccacgtcacctgcgcgcacgcagctggtgtcccc
atggagccggacgactggccctatgtcgtgtccatcacttgcttcaaacacaaagcagct
aaccagaatattccatttcgaagggaggtgacccttggacagactgtgatcacgaagaac
cggaatggactctactacaggtgtaaagtcattggcatgacaacacagactttctacgaa
gtcaactttgacgatggttcatacagcgacaatgtttacccagaaagcattattagcaga
gactgcatccagatgggaccccctccagagggcgagttggtgcaactgcagtggacagac
ggaatcgtctacaaggccaagtttattgcagcccagatcagtcagatttaccaggtcgag
tttgaagatggttcccaactgatggtaaagcgtggtgatatttataccttggaggaagag
cttcccaagagagtgaagtctcgcctgtccctcagcactggggcccctcaggaagatgta
ttttcgggagatgaagtgagagcagccaagcgcccccggctggggaattcaagaaatccc
gaagaatacggacaaaacccagattacttggcctttatggagagcctgttgcagacacag
taccagccgggaactcagagcaacatgttttaa

DBGET integrated database retrieval system