Rissa tridactyla (black-legged kittiwake): 128900567
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Entry
128900567 CDS
T09443
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128900567 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rtd04091
]
128900567 (FREM2)
Lectins [BR:
rtd04091
]
C-Type lectins
Lecticans
128900567 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
128900567
NCBI-ProteinID:
XP_054037832
LinkDB
All DBs
Position
1:30640611..30779306
Genome browser
AA seq
3164 aa
AA seq
DB search
MMQVLPAAPRRLLAGLLLLAGCVWVGAPEPPPGTAAVSSPWAPEAAPVVVANRGLRVPLG
RSAWLDPARDLVLQVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGPGEVQYSHLGGR
SPARDRVRLQLRYDSPSRALVLPLVLEVEVLFTQLEIVTRNLPLTVERLRGTSNPLDARS
LEFAFEPGRQRCRVGLLPPLAGLPRYGEILNYPPAAAAPVAAGGEAAGGGPVPASMWDCE
EFLRLGLRYRHTAAGGSPNRDLVPLVAELREASGSGALLKREYFQVLVRIRAGTENVAPK
PSFLAMLMMEVDQFVLTALTPDMLAAEDAESPPDLLLFNITSSFGPGQGHMVSTDDRSLP
VSSFSQRDVRELRIAYQPPTEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAP
VVTRNTGLVLYEGQSRPLSGPGPSPNLVISDEDDLEQVRVSVVAGLRHGHLTLLEDSPVP
AAPRKHFTVAELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHRVEFLFPITLVPTDDQP
PLLNANTGLAMAEGETVPITTRALSATDIDSQDAILLFTVESGPTAGQLLLRQAQPPPGW
EEEEEDEGFSWRRVPGLAGSSLIYEKPVREWLQQDIVEGRLYYHHFGPHSPGPGVVLDQF
VFRVQDDNDPPNRSGPQTFVIRVHPVDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYTD
QDSGDRELRYTITQPPTDTNHPPDVYGSRLGSLVLTEDHSVEVTHFTQAQINHHKISYRP
PQEELGVAPHLIQFQYQVQDAAGNTAEGTFTIYLQPVDNQPPEITNTGFTLPEGGSHVLS
PTELDASDTDTELAHLRFILTQAPRYGQLQLSGYSLIPGAVFGLEDIRQGRVVYVHSGAE
TNSDTCRLDVSDGVHFVPITLKMNVHPVDDEVPMLRLPPGTLGSYLDVLENGAAEITANV
IQGTDEDTDDLMLTFIVEDPPQHGNILVQGVPAERFSQRDVLDGVVVYAHTGGEIGRLPK
EDTFNLTLSDLSEEWSVRGNVVQGVSVLVTILPVDSQAPEIFVGEQFMVTEGDRRVITPA
HLRAEDVDTPNDDILCTIVAQPTSGYVENISPAPGSEKSRAGVAISAFTLKDLRQGHIFY
VQSIHKGVEPVEDRFAFRCSDGINFSQRHFFPIVIIPINDEEPEIFIREFVVMEGMSLVI
DTPILNAADADVPADELMFTITRLPSHGHIVNQLVNGTVLVESFTLDQITESSNILYEHD
DSETKEDSFEVKLTDGKHTVRKMVLIMVIPVDDETPRMAINDGLEIEIGETRTIHNRILK
ATDLDSEDKTLTYIIRYGPGQGLLQRIKPSGGVENITLGMNFTQDEVDRNLIQYMHFGQE
GVRDLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSD
LNSPDENLVFTITRAPVRGHLECTDQPGVPISTFTQLLLAGNKVYYIHTSEDEVKMDSFE
FEVTDGYNPVFRTFRISISDVDNKKPVVTIHNLVVSENEYKLITPFELTAEDRDTPDSLL
KFILTQIPVHGQIMFNNSKPVTTFTKQDLNENLISYKHDGTESVEDSFSFTVTDGTHTDF
YVFPNTVFETKKPQTMKIRIMAVDNSVPQIVINKGAQTLRILATGHIGFLITNKVLKVED
RDSLHATLKIRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRGGDNATSDIFH
FMVEDGGGNKLKNQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTK
DGTAKKDKDFRGKAQKQVQFNPGQTLATWRVRILSDGEHEQSESFQIVLSEPVMAVLEFP
GVSTVEIIDPGDESTVFIPQSTYSIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGT
APTSVLSYSDYISRPEDHNSILRFDKDEREKMCRIVIIDDSLYEEAETFDVLLSMPMGGR
IGAEFPSTRITIVPDKDDEPAFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTVRSR
KSEPITAEAGIDYVGISRNLDFSPGVNMQTFRVVILDDLGQPVLEGTEKFELVLRMPMNA
ALGEPSKATIFINDSVSDLPKMQFKESVYIGNENDGQISAMIYRSGDIRYTSTVRCYTRQ
GSAQVMMDFEERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEEEELRLVLGTPRSDSSF
GASIGEQNETLIKIQDDADKAIIKFGETKFSVSEPKDVRQVAVVKIPVLRLGDTSKVSVV
RVHTKDGSATSGEDYHPISEEIEFKEGETQHFVEIEVLFDGVREMREAFTVHLKPDENMV
AEIQTAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDISRAKDRTSPIAGYPVICITACN
PKYEDFEKTGSICASENINNTLTRYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMITLD
SIYFQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGLCQPRMSGVVGAEPFSAKLRY
TGPEDPDYTNLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTE
VKTHHGFLTDATKNPDVIGETIPYQYSPTIRGFKTLRFYRNLNLEACLWEFVSYYDMSEL
LTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDT
AILWKDGIGSPPEAELQGSLYPTSMRISEDGRLVVNFKTEARFHGVFVMSHPASSLTSMV
MSADHPSLTFSLSLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLIACTTAPHQEYSL
PVVCNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAF
SEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLY
RFKIVDKAQPETQATSFGSVLFNAKLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGRE
WYVHTIYTVRSKENANRGIGKRSVEHQYHSLSSGGSSGASAQRRQKRGAEQAPELAKDIG
VENNRGTNIQHIALDRASKKQVPQREVAVNGVLPRELNNQSAGVSVVTVIGGAAAVFLAI
CLIAIIILLLKRKQNSEKKETTKESGSNEPMMLPYNYTSDSSEV
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggttctccccgccgcgccgcggcggctgctggccggcttgctgctgctggcc
ggctgcgtttgggtgggggcgccggagccgccgccgggcaccgccgcggtctcctcgccc
tgggcgccggaggcggcccccgtcgtggtggccaaccgcggtctgcgggtgcccctgggc
cgctccgcctggctggaccccgcgcgggacctggtgctgcaggtgcagccgggggaccgg
tgccacctcaccgtgctggacgaggacccgctgtggcagcgcccgggccgcctgagcccc
aggcgcttcccctgcgacttcgggcccggcgaggtgcagtactcccacctgggcggacgc
agccccgcgcgggaccgcgtccgcctccagctgcgctacgactcgcccagccgcgccctg
gtgctgcccctggtgctggaggtggaggtgctcttcacccagctggagatcgtcacccgc
aacctgcccctcaccgtcgagcgcctgcggggcaccagcaacccgctggacgcccgcagc
ctggagttcgccttcgagccgggacggcagcgctgccgggtgggcctgctgccgccgctc
gccgggctgccccgctacggagagatcctcaactaccccccggcggcggcggcgccggtg
gccgcgggtggagaggcggcggggggcggcccggtgcccgcctccatgtgggactgcgag
gagttcctgcgcctggggctgcgctaccggcacacggcagccggcggctcccccaaccgt
gacctggtgccgctggtggccgagctgcgggaggcgtcgggcagtggggcgctgctgaag
cgcgagtacttccaggtgctggtgcggatccgggccgggactgagaacgtggcccccaaa
cccagcttcttggccatgctcatgatggaggtggaccagtttgtcctcactgccctcacg
cctgacatgcttgcggctgaggatgctgagtcaccaccagacctgctgctcttcaacatc
acctcgtcctttggccctggccaggggcacatggtcagcacagatgaccggagcttgcct
gtctcctctttcagccagcgggatgtgagggagctgcgcatcgcctaccagccacccaca
gaggactcggatcgggagcggctctttgagctggagctggaagtgttggaccccgagggt
gctgcctcagagccctttgcgtttgtcattgtggtgaagcccatgaacaccctggcacct
gtggtgacccgcaacactggcctcgtgctctatgaggggcagtcacggcctctctcaggc
cctggtcccagccccaacctggtgatcagtgatgaggatgaccttgagcaagtgcgggtg
agtgtggtggcagggctgagacacggccaccttactttgctggaggactccccagtacct
gccgcccctcgtaaacacttcaccgtggctgagctggcagcaggccgggtcatttaccag
catgatggcagtgagtctccacttagtgacaacctggtgctgcgtctggaagatggtggc
tctcgacaccgtgttgagtttcttttccccattaccttggtgcccactgatgaccagccg
cccctactcaatgctaacacagggctggccatggctgagggtgaaacggtgcccatcacc
acccgtgctcttagtgccactgacattgactcgcaggatgccatcctgctcttcacagtg
gagtctggccccactgctgggcagctcctccttcgtcaagcacagccgcctcctggatgg
gaagaggaggaagaagatgagggcttttcttggaggagggtgccgggtttagcagggagc
tccctaatctatgaaaagccagtgagagagtggctgcagcaggacattgtagaagggcgt
ctctattaccaccactttgggcctcacagtcctggccctggggttgttttggaccagttc
gtcttcagagtccaggatgacaatgacccacccaaccgctccggaccacagacttttgta
atccgggtacatcccgtagacagattagccccagagctgcatagtagcagcagcctgcac
ttaatagttgcagaacagcaggtgaccccactgcggaggaaacacttgtgttacacagat
caggattcaggggaccgtgaactccgctatacaataacacagccccccactgacactaac
catcctccagatgtatatgggtcccgccttggatccctcgtgctgactgaggatcactct
gtggaagttacccacttcacccaagcccagatcaaccatcacaagatatcgtaccgtccc
ccacaggaagaactgggggtggctcctcatttgattcagtttcagtatcaagtgcaagat
gcagctggcaacacagccgaagggactttcaccatctacctgcagcctgtggataaccag
cctcctgaaatcactaacactggcttcactttgcctgagggaggcagccatgtcctcagt
ccaactgagctggatgccagtgacacggacactgagcttgcccatctcagatttatcctg
acccaggctcctcggtatggccagttgcagctttctgggtacagtttgattccaggagct
gtctttggcctggaggatatcagacaagggagggtggtgtatgtgcacagtggagctgaa
accaacagtgatacctgcaggcttgatgtgagtgatggcgtccattttgtgcccatcaca
ctgaaaatgaatgtgcacccagttgatgatgaggttcctatgctacggttgcccccaggc
actcttggttcctacctggatgtgctggagaatggtgcagctgaaatcaccgctaatgtt
attcagggcacagatgaggatacagatgacttaatgttgaccttcattgtagaggatcct
cctcagcatggaaacatcctggtccaaggggtgcctgcagagagattttcacagagagat
gtgctggatggtgttgtggtatatgctcacactggtggggaaataggccgcctgcccaaa
gaagataccttcaaccttaccttgtctgacctgtctgaggagtggagcgtcaggggcaat
gttgtacaaggagtttcagtcttggtgaccattcttcctgttgacagtcaagctccagag
atttttgtgggggagcagttcatggtaacggaaggtgacagacgggtcattactccagct
cacctcagggctgaagatgtggatactcctaatgatgatatactctgcaccattgttgct
cagcctacatctgggtatgtagagaacatctccccagccccaggatctgaaaaatccaga
gcaggtgtagctataagtgcttttaccttgaaagacctccgtcaagggcatattttttac
gtccaaagtatacataagggtgtggagcctgttgaagacagatttgctttccgctgttct
gatggcattaacttttcccaaaggcactttttccccattgtcattataccaatcaatgat
gaagagcctgaaatctttatacgagagtttgttgtgatggaaggcatgagcctggttatt
gatacccctatcctcaacgcagctgatgcagacgtccctgctgatgagttaatgttcaca
atcaccagacttcccagccatggccacattgtgaaccagctggtcaatggaactgtccta
gtggagagcttcaccttggaccagataacagagagctccaacatactctatgaacatgat
gactctgagacaaaggaggacagttttgaggtgaaactcacagatggtaaacataccgtt
agaaaaatggtactcatcatggttattcctgtagatgatgagacacccagaatggccatc
aatgatggtttggagattgaaataggggaaactagaactattcataacagaatattgaag
gctactgatctagattctgaagacaaaaccttgacatacattataagatatggaccagga
caaggcctcttgcagagaataaagccttcgggtggagttgagaatattaccctggggatg
aacttcacccaagatgaagtggatagaaacttaattcaatatatgcattttggccaagaa
ggagttcgtgatcttatcaagtttgatgtgacagatggaataaatcctctcattgaccgc
tacttttatgtgacaataggtagcattgatattgtcttcccagatgtaatcagcaaagga
gtttctttgaaggaaggagggaaggtaacccttactactgatttgcttagcaccagtgac
ctgaatagtccagatgagaacttagttttcactataaccagagcacctgttcgtggtcat
cttgaatgcacagatcagcctggggtacccatctccacttttactcaactcttgttagca
ggcaataaagtctattacattcacacttcagaagatgaggtgaaaatggacagctttgag
tttgaggtgactgatggctataaccctgtttttcgtactttcagaatttctatcagtgat
gtggacaataagaaacctgttgtcacaatccataacctggtggtgagtgaaaatgaatac
aaactgataaccccatttgaactgactgctgaagacagagatacacctgactcattgcta
aaatttatcctcactcaaataccagttcatggtcagatcatgttcaataactccaaacca
gtcaccaccttcactaaacaagatctaaatgaaaatctaatcagctacaaacatgatggc
acagaatcagttgaggatagcttctctttcactgttacggatggcactcacactgatttc
tacgtcttccccaacactgtgtttgaaacaaagaaacctcagactatgaagattcgaata
atggctgtggacaacagtgtacctcaaattgtaataaataagggtgctcagactctccgt
attctagccacaggtcacattgggtttctgattaccaacaaggtgctcaaagtggaagac
agggacagtttacatgctactctcaagatcagaatcacagagggtccacgccatggcttc
ctgattcacctggggaaaggcaaccatagcatcagccagttcactcaagctgatattgat
gatatgaagatatgctatgttttacgagggggtgacaatgccaccagtgacatttttcat
ttcatggttgaagacggcggaggcaataagctgaagaatcaacattttcgcctaaactgg
gcatggatctcgctagaaaaggagtattatttagtaaatgaagactccaaatatcttgat
gttgttcttaagcggagaggttacctgggggaaacctcttttataagtattagcaccaaa
gatggtactgccaagaaagacaaagacttcagaggaaaagcccagaagcaggtgcagttt
aatcctggccagaccttagctacatggcgagtacggattttgagtgatggtgaacatgaa
cagtctgagtcttttcaaattgttctttctgagcctgtcatggcagttctggaatttcct
ggtgtatccacagtggaaattattgacccaggagatgaatcaactgtctttattcctcag
tccacctatagtattgaagaagatgttggtgaattatttattccagtcagaagaagtgga
gatgtgagccaggaactgatggttatctgctacacacaacaaggaacagcatctggcact
gccccaacctctgtactttcttactctgactacatatccaggcctgaggatcacaacagc
attctacgttttgacaaagacgaacgagaaaaaatgtgtcggatagtcatcatagatgat
tccttatatgaagaggctgagacctttgatgttttgctgagcatgccgatgggtggaaga
attggtgcagaattcccgagcactcgaattaccattgtacctgacaaggatgatgaacca
gcattctactttggaaacgatgaatactatgttgacgagagtgctggctatgttgaagta
cgtgtctggaggactggaactgatctgtctaaagctgcatctgttacagtgaggtctcgc
aaatcagaaccaataactgcagaggctggaatagattatgtaggcatcagtcgtaatttg
gatttttcccctggagtcaatatgcagacatttcgtgtggtaattctggatgaccttggg
cagccagtattagaaggaactgagaagtttgagcttgtgctaaggatgcccatgaatgct
gctcttggagaacccagcaaggccaccatcttcattaatgactcagtctctgacttgcct
aagatgcagtttaaagaatctgtatatataggcaatgaaaatgatggacagatttctgcc
atgatatacaggagtggggatatccgatacacatccactgtgaggtgctatacaaggcaa
ggttcagctcaggtaatgatggactttgaagagcgtcctaacactgacagttccatcatc
acattccttcctggtgaaacggagaagccttgcacactggtgcttatggatgatactttc
catgaagaagaggaagaactacgtctggttcttggcactccaagaagtgattcttccttt
ggtgcctctattggtgaacaaaatgagaccctgataaagattcaggatgatgcagacaag
gctattattaagtttggtgagacaaaatttagtgtgagtgaaccaaaggacgtgaggcaa
gtagcagttgtaaaaatcccagtgcttcgtctgggagacacttccaaggtttctgttgtg
agagttcatacaaaggatggatctgctacttctggagaagactatcatcctatatcagaa
gaaattgagtttaaggagggtgaaacacagcattttgtggagattgaagttctctttgat
ggagtaagggagatgagagaagccttcactgttcacctgaagcctgatgaaaacatggtc
gcagaaatacagacagccaaggccattgtttacattgaggaaatgaacagcatggcagat
gtcacctttccctctgttcctcaagttgcatcccttttgatatatgatgatatttctaga
gccaaagacagaaccagtcccatagctggctatcctgtcatctgtatcacagcttgcaat
cctaaatatgaagattttgaaaagactggttcgatatgtgccagcgagaacatcaataat
actctgacacgataccggtggctagtgagtgcacccactggtcctgatggtgtgactagc
cccatgaaggaggttgacttcgataccttcttcacttcctccaagatgattacgcttgac
tccatttactttcaagctggttctcgtgtccagtgtgcagctcgtgctgtgaattcagat
gggaatgagggtcttgagcttatgagccctattgtaaccataagcacatcagaaggtctt
tgtcaacctcgtatgtcaggagtagttggagcagaaccattctctgccaaattgcgctat
actggcccagaagatcccgattataccaatctcatcaaattgacagttacaatgccacat
attgatggcatgctgcctgttatttctacaagagagctctccaactttgagctgacactt
agccctgatggaactagagttggaaaccataaatgctccaacctgttggattacaccgaa
gtgaagacccaccatggtttcttgactgatgctaccaaaaatccagatgtgattggagag
accattccctatcaatacagcccaacaattagaggcttcaaaaccttacgcttctaccgc
aatctgaatctggaagcctgtctatgggagtttgttagctattatgacatgtctgagctc
cttacagattgtggaggcaccattgggacagatggacaggttctcaacctagtacagtcc
tatgtcacgctgagagtccccttgtacgtctcgtatgttttccactctccggtgggtgta
ggaggctggcagcatttcgacttacagtcagagctccgtctgacttttgtgtatgacact
gccatcctgtggaaggatgggatcggtagcccgcctgaagcagagctgcaaggttccctg
tacccaaccagcatgcgtattagtgaagacgggcgattggttgtcaacttcaagactgaa
gcccggtttcatggtgtctttgtgatgtcccatcctgcttcatctctaacttccatggtt
atgtcagctgatcacccaagcctgacgtttagtctcagccttatccgaagtgagccaacg
tacaaccagccagtacagcagtggagctttgtttcagattttgcggttcgagactattct
ggaacatacactgtgaagctgatagcttgtaccactgctccacatcaggagtacagccta
ccagtggtctgcaatcctagagagccgatcacatttgatctggatatacgattccagcag
gtcagtgacccagtggctgctgagttcagcttgaacacccagatgttcctgctctccaaa
aagacactgtggctatccgatggctcaatgggctttgggcaagaaagtgatgttgctttc
tcagaaggtgatatcatttatggtcgggtgatggtggatccagtgcagaatttgggtgat
tccttctactgtagcatcgagaaggttttcctgtgcacaggagctgatggatatgtaccc
aaatataatccatccaacactgaatatgggtgccttgctgattctccatcccttctgtac
agatttaagattgtggacaaagctcagccggagacgcaagccacaagctttggaagtgtg
ctttttaatgcaaaacttgcaatagatgatcctgaagcaattccgttagttaaacagcca
ggttctgatgggtttaaagtagactcaactcctctatttcaggtgtctttgggtagggag
tggtatgtccatacaatctacactgtacgttcaaaagagaacgctaatcgtggaatcggc
aaaagaagcgtggagcaccagtaccactcactctctagtggtgggagctcaggagcatcc
gcacagagacgtcagaagaggggagctgagcaggccccagaacttgcaaaagacattgga
gtggaaaacaaccgaggaacaaacatacagcacatagcactagatcgcgccagcaagaaa
caggttccccaaagagaggttgcagtcaatggcgttctccccagggaactgaataaccaa
agtgcaggggtcagcgtagtcacagtcattggtggagctgctgccgttttccttgccatc
tgcttaattgcaatcatcattttgctgctaaaacggaaacaaaattctgagaagaaggaa
accacgaaggagtcggggagcaatgaaccaatgatgctaccgtataattacaccagcgac
agctcggaggtttga
DBGET
integrated database retrieval system
