Rissa tridactyla (black-legged kittiwake): 128900741
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Entry
128900741 CDS
T09443
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128900741 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
128900741 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128900741 (LSM4)
03041 Spliceosome [BR:
rtd03041
]
128900741 (LSM4)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128900741 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
128900741 (LSM4)
Spliceosome [BR:
rtd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128900741 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128900741
NCBI-ProteinID:
XP_054038193
LinkDB
All DBs
Position
22:complement(1427028..1434575)
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AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtccctgctgaagacggcgcagaaccaccccatgctggtggagctgaag
aacggggagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaggtcatctgcacgtcccgggatggagacaagttctggagaatgccggagtgctac
attcgtggcagcacgattaaatacctgcgtatccccgatgaaataattgacatggtgaaa
gaagaggtggtgtccaagggcagaggccgtggcgggatgcaacagcagaagcaacagaag
ggccgcggtgttggcggtgctggacgaggtgtgtttggtggccgtggccgaggaatccca
ggcagcggaagaggccagcaggaaaaaaagccgggcagacaatcggcaaagcagtga
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integrated database retrieval system
