Rissa tridactyla (black-legged kittiwake): 128900757
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Entry
128900757 CDS
T09443
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128900757 (HDGFL2)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128900757 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
128900757
NCBI-ProteinID:
XP_054038216
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Position
22:125642..136397
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AA seq
647 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDVPENDPMGGSDAGDDE
EDAAMAAVATEKMESDEDSDRGSDHSGLKRKSLAMKMPVAKRPRKSSSDLDQGSPSLTEE
ENSETSSESEKNSDQDFTPEKKPVARAPRRMPAAGRKKKKVESGSDSDSKVDSDSEMGNA
TVDMTKSDSNSDSDSDVSVKKAPRGRKPAEKPPPKPRGRKPKPERVPTSSSSDSDSDSDV
DRISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKSEEVHSDSDSS
AEDEVAKKGRKGRAKAPSSSDSELELEKEVKKPAKKQPSELSRKPNQKEKRGRAEEKPPR
NKPLKVERGRKKSDLIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEE
LGTLQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMEAIQKAN
KAGPEKDKGEAEKGQEKLSGGETRNEKGEEETNADLSGPVNGESLSQKAEGTEEKDKSQG
PGAREPDGSTEETHNNSMQDYPKAERAVPERERARGESEAVDDAEES
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcaagcccggagacctcgtcttcgccaagatgaagggctacccgcac
tggccagcccggattgatgacatcgcggacggcgctgtgaaacccccaccgaacaagtac
cccatcttcttcttcggcacccacgagactgccttcttgggccctaaagatctcttccct
tatgaaaaatataaagacaaatatgggaaaccaaacaagagaaaaggcttcaacgaggga
ttgtgggaaatccagaacaaccctcacgccagttacagtgcccctgcgcctgcgagctcc
tccgacagcgacgttcctgagaacgacccgatgggaggaagcgatgcaggtgatgatgag
gaagatgctgccatggctgcagttgccacggagaaaatggaaagtgatgaggactcagat
cgaggcagcgaccacagcgggctcaagcgaaaatcgctggctatgaaaatgccggtggca
aaacgtcctcggaaatcctccagtgacctggatcagggcagcccctccctgacagaagag
gagaactcggaaacatcttctgagtcggaaaaaaacagcgaccaggacttcactcctgag
aagaagccagtggccagggcaccccggaggatgccagcagcagggaggaagaagaagaaa
gtggagtccggttctgactcagactccaaagtggactcggattcggaaatgggaaatgca
actgtggacatgaccaagtcagactctaactccgattcagactcagatgtgtctgtgaag
aaggctccgcggggcaggaagccagctgagaaaccccctcccaagccccgtggcaggaaa
ccgaagcccgagcgtgtcccgaccagctccagcagtgacagtgatagcgatagtgacgtg
gaccgcatcagcgagtggaagaggcgagatgaagaacgacggcgggagctggaggagaag
aggaagagggagcaagaggaagagatccgccggctccgggagcaggagaaggaggagaag
gagaagaggaaggagaaagcggagaagagtgaggaggtgcactcagactcagacagcagt
gcagaggatgaagtggccaaaaagggacggaaaggccgggccaaggccccgtcctcctca
gactctgagctggagctggagaaagaggtaaagaagccagcgaagaagcagccctccgag
ttgtcaaggaaaccaaatcagaaggagaagaggggccgcgcagaggagaaaccaccacgg
aacaagcctttgaaagtggaacgaggccgaaagaaatctgacctgatccctgaaaggagg
atggagaagaaaaaggagcccacagtcgaagagaaacttcagaaacttcacagcgagatc
aagtttgccctgaaggttgataacccggacatcaagcggtgtttgaatgcgctagaggag
ctgggcacgctccaggtcacctctcacatcctccagaagcacaccgacgtggtggctacg
ctgaagaagatccgtcgctataaagcaaacaaggacgtgatggagaaagctgctgaagtc
tacacccggttgaagtcgcgtgtcctgggaccaaagatggaggcgatccagaaagctaac
aaagctgggcctgagaaggacaagggggaggcggagaagggccaggagaagctgtcggga
ggggagacacggaatgagaagggggaagaggagacgaatgctgacttgtcgggtcctgtg
aatggcgaatccctgtcccaaaaagcggagggcacagaggagaaggacaaaagccaaggg
ccaggagccagagagccggacggatccaccgaggagacccacaacaacagcatgcaggac
tatcccaaggccgagcgagccgtgccggagcgggagagggctcgcggggagtcagaggct
gtggatgatgcggaggagagctga
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