Rissa tridactyla (black-legged kittiwake): 128900780
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Entry
128900780 CDS
T09443
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128900780 (MEX3D)
04121 Ubiquitin system [BR:
rtd04121
]
128900780 (MEX3D)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128900780 (MEX3D)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128900780 (MEX3D)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128900780 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-RING_2
KH_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
128900780
NCBI-ProteinID:
XP_054038272
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All DBs
Position
22:complement(5932399..5943624)
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AA seq
588 aa
AA seq
DB search
MPGSIYQPEGGQPPRGPPRCLALLSPPPPPPPAGQDPPPPEPEREGPPPVQDEAAALRFA
LDQLSLLGLEEAGERGLRAAEAGGEEPEAAAGAAGPGGLQGRERGGSPPAAAASPPAPAA
FGNFAPPLAPPAALLAEPLGGRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNT
YIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSMIRATRNKANGLTGAMQGPPNLP
GQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAR
EEIEAHITMRTGSFIDVNADNDFHSNGTDVCLDLQGSTASLWAKAPHPARRPATALRNDS
LSSLGSTSTESYYSGRVADASPTSPYSTSSGFTFSEPPAPLGSEECDFGFDFLALDLTTP
TTIWSPFERSGNPLQAFSSCSSISGSQRRNSGAATPRHSPTLPESGGVALDHPLARRIQS
DPVSTLSWLPTQGSLSSFSNSTGYSSSSSLPGSVSATSGSPTDSSSSDGHRKSSRECMVC
FESEVIAALVPCGHNLFCMECAMRICGKAEPECPACHTPATQAIHIFS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccatctaccagcccgagggcgggcagcccccccgcgggccgccgcgctgc
ctagcgctgctcagccccccgccgccgccgcctcccgccgggcaggacccgccgccaccg
gagcccgagcgggaggggccgccgccggtgcaggacgaagccgccgccctgaggttcgcc
ttggaccagctctcgctgctggggctggaggaggcgggcgagcgcgggctgcgggcggcg
gaggcgggcggcgaggagccggaggcggcggcgggggcagcggggccgggcggcctgcag
gggcgggagcgcggcgggtcccccccggccgccgccgcctcccccccggccccggccgcc
ttcgggaacttcgccccgccgctggcgccgcccgccgcgctgctggccgagccgctgggc
ggcaggaagaagagcgtgaacatgaccgagtgcgtcccggtgcccagctccgagcacgtc
gccgagatcgtgggccggcaaggctgcaaaatcaaagccctccgtgccaagaccaacacg
tacatcaagacgccggtgaggggcgaggagcccgttttcatcgtgactgggaggaaggag
gacgtggagatggcgaaaagggagatcctctcggccgccgagcacttctccatgatccgg
gcgacgcgcaacaaagccaacgggctgacgggagccatgcagggaccccccaacctgccg
ggacagaccaccatccaggtgagggtcccctaccgtgtggtggggctggtggtggggccc
aagggagccaccatcaagaggatccagcagcagacgcacacctacatcgtgacccccagc
cgagacaaggagcccgtcttcgaggtgacgggcatgccggagaacgtggaccgggctcgg
gaggagatcgaggcgcacatcaccatgcggacaggctccttcattgacgtcaacgccgac
aacgacttccactccaacggcaccgacgtctgcctggacctgcagggcagcacggccagc
ctgtgggccaaagccccccaccctgcccgccgccccgccaccgccctgcgcaacgacagc
ctcagctcgctgggcagcacctccaccgagtcctactacagcgggcgggtggcggacgcc
agccccaccagcccctacagcaccagcagcggcttcaccttcagcgagcccccggccccg
ctgggctcagaggagtgcgacttcggcttcgacttcttggccctcgacctcaccaccccc
accaccatctggtcgcccttcgagcgctcgggcaaccccttgcaggccttcagcagctgc
tcctccatcagcggctcgcagagacgcaacagcggcgcagccacgccgcgtcactcgccc
accctccccgagagcggcggcgtggccctggaccaccctttagcgcgccgcatccagagc
gaccccgtcagcaccttgtcctggctgcccacccaaggctcgctctcctccttctccaac
agcaccggctactcctcctcctcctccctgcccggcagcgtctccgccacctcgggctcg
cccaccgactccagcagctctgacgggcaccgcaagagctcccgcgagtgcatggtgtgc
ttcgagagcgaggtgatcgccgccttggtgccctgcggccacaacctcttctgcatggag
tgcgccatgcgcatctgcggcaaagccgagcccgagtgtcccgcttgccacactcccgcc
acgcaagccatccacatcttctcctag
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