Rissa tridactyla (black-legged kittiwake): 128900788
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Entry
128900788 CDS
T09443
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128900788
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtd03310
]
128900788
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128900788
Nuclear receptors [BR:
rtd03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128900788
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128900788
NCBI-ProteinID:
XP_054038284
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Position
22:6322383..6337524
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AA seq
481 aa
AA seq
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MPITDHYAFPAPFFSSAAAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASY
SCSRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQ
EQSGGTKDEPEPLSRVYTTSISSGLSDLDDISTLSDGLLFDFPLTPDGSSTYYNLDLLAS
AQPSPDQSSLDVADATLIKQESIYELMLEPALFAHGGLEGGQLAPDISVLEIDRVAQNVV
KSHLETCQYTTEELKRLAWSLYSPEEVRALQSKSCEAMWQQCSLQISNAIQYVVEFAKRI
DGFMELCQNDQIILLKAGCLEVLLIRMIRAFNPLNNTILFEGKFGGVQMFKSLGCDDLIG
AVFELARTLCRLQLSDEELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKH
SAEDKLSKMVSKLPLMKTICNLHLDKLEFFRLLHPETAMNFPPLYKEVFNSELQYSDPRE
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactgaccactacgcctttcctgccccctttttctcctccgccgcagcccaa
attgaagtgatcccatgcaagatctgcggagacaagtcctcggggatccactatggcgtt
atcacctgcgaaggctgcaagggattttttcggcggagccagcagaacaatgccagctac
tcctgctccaggcagaggaactgcctgatcgaccgcaccaaccgcaaccgctgccagcac
tgccgcctgcagaaatgcctggcgctgggcatgtcccgcgacgccgtgaagttcggccgc
atgtcgaagaagcagcgggacagcctttacgccgaggtgcagaagcaccagcagagccag
gagcagagcggcggcaccaaggatgagcccgagcccctgagccgcgtctacaccaccagc
atcagcagcgggctctcggacctggacgacatctccacgctgtcggacgggctcctcttc
gacttccctctcacccccgacggcagcagcacctactacaaccttgacctgctcgcctcg
gcgcagccctcgcccgaccagtccagcctggacgtggctgatgccacgctcatcaagcag
gaatccatctacgagctgatgctggagccggccctctttgcacacggtgggctggagggc
ggccagctggctcccgacatctctgtcctcgagattgaccgggtggcccagaacgtggtg
aagtcacacctggagacgtgccagtacacgacagaggagctcaagcgcctggcgtggagc
ctctactcccccgaggaggtccgcgccttgcagagcaagagctgcgaggccatgtggcag
cagtgctcactgcagatctccaacgccatccagtacgtggtggagttcgccaagcgcatc
gacggcttcatggagctctgccagaacgaccaaatcatcctcctgaaagccggttgcctc
gaggtgctcctgatccgcatgatccgggcgttcaaccccttgaacaacaccatcctcttc
gagggcaagttcggtggcgtgcagatgttcaagtcgctcggctgtgacgacctcattggc
gccgtcttcgagctggcgaggaccctgtgccgcctgcagctgtcggatgaggagctcgcc
ctcttcaccgccgccgtcctgctctccccggatcgcccgtggctgacggagtccaagaag
gtgcagaagctccaggacaagatctacgtggccctgcagcacgagatccagaagaaacac
tctgccgaggacaagctctcgaagatggtttccaagctgcccttgatgaagaccatttgc
aacctgcacttggacaagctggaatttttccgtctcctgcacccagagaccgccatgaac
ttcccacccctctataaggaggttttcaactcggagcttcagtacagcgacccacgggag
agctaa
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