Rissa tridactyla (black-legged kittiwake): 128900794
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Entry
128900794 CDS
T09443
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128900794 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
128900794 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
NACHT
WD40_MABP1-WDR62_1st
AAA_16
NPHP3_N
ANAPC4_WD40
Beta-prop_NWD2_C
AAA_22
AAA
PQQ_2
RNA_helicase
Rad17
AAA_19
ATPase_2
AAA_5
DAP3
RuvB_N
ResIII
Spore_III_AA
NB-ARC
nSTAND3
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
128900794
NCBI-ProteinID:
XP_054038289
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All DBs
Position
22:1021948..1035340
Genome browser
AA seq
1582 aa
AA seq
DB search
MRVRGVSTHACDRVHICANLFSYLNDLVFPCHCFYDRIDESKNIKKNIFVQVIDLRWGIL
SLXDSDHRNTQLSLEEIKACQKLSAGLTFIGLLGDHCGHQPAPRLIAKKEFEALTLQLPG
DSAQLLTQWYQRDENTLPACYVLQPAAGQAWHHLERRLASALCLAALKAERCGLLDPEQR
HRYHKSVIAWEIEQGLLNTWQSNPGAFVFLREVEDPNTQNGQGTTSELLEKEDNLDSEAK
QLPSNLKAKMASHYPEHLKVHTLACSKDSGNPQCKENNKYLKQLCEQFTAVANHQVLENL
RYXGQISEEPGRLLQELSHHAALCLKNCRFSCGRQNLLDNVFHSVRQNNDKTHTTLILYG
PPGCGKTAVMCKLSEQVQAVLGQDSVVVIHLMGTSQRSSAIRSLLRDIXLQVCLAFDLPP
PPTQTKQACSDLVLFLSKLLLTVSHCGTQTLVMFLDSLERLLPGDGAHRFHWLPTDCPPX
VHIVISVSTGEPDTLKALQHAVPEAEAYFEVGPLSSEEGEEMLETLLASDRXRLSPAQQA
YFHQSFPSGGQALLFKLASHEARKWASYTSPSELVIASTARDATHRLCERLEKSHGTVLV
AHVLGYTASSRNGLSDMELKDILSLDDEALSEIHHCHLPSSKTILRLPPLHWARLCSDLG
ERLAERKADGFTLLCVAHGQFVEMVQNRSLSKQDQIKRHFLLADFFKGTWSWGMKKPRTL
PHLSRTLNADRKVAPQPLWFSDTVPNLRKLSELPFHLLNAGRIEELNQDVLGNMNWISCK
IIASGIEXVVDDFAMCTECIPCPELRLVQETLLLLKPALSSVRSPEGVSIIYTEMLARLL
SFVPSYPEVIGKLCQQCLSRCSVCPYPVLIPLCGFLQPPGGPLHTMLTGFLEGVTVMALS
SDHRLLVAGSQDGSMFVWNMEVLEMLRVLPGHSAEVRCVKVFGKGTSAVSAAMDHSLRIR
NLISGRARFIIRDTHIEELPSHHLHVDEGHMIVYSSSDTKVNAWHLETAELIFQISGEAS
DAWMFSAVFGPQLVIMTVSEGGTLSLWNSNTGELRSKRQLSGLQEETPTSSVLIQKQGKM
IVGFSRGSLSMISSDGNSLLQKLPGRVCFVVASEDESILAAGFEEYVRVYLADSKGFHRF
LAADLEHKGAVQTAVISAGNDIIITGSQAASIQVWSLAEQGLLTDTLDGMGAPVMLLALC
DCTLVSASHSAPHLRVWNLIYNHQQKTLVPVPNTGCAALSHGGNYVYFTQPEDTHKVIIW
DATEGEVCDTQDTSARVRCLETAEQNQLLFIGLTSGTVLVFPLNSRRDVACIPPPESQKP
VNNIAINKQEKQLAIAHDDLVLVLDIIAADPCPVIDRPAYTFKTQIPGTLISRVVVLADC
RVLYGMTRGDLFLYDCPRAQVFPLKSHRSQISCLESSHGEQQALSGSEDSLQCLWDLEFC
QQEHEMCYYKPTSLLKGICCACFSKDDKYVYTGSLDQAITVRDVASGALLAVQCIYTTAL
RIVPTADGFVATTKAGCVIREQFHCPKTTPPRYNPLQNMVATCTVKSRKKDKENSRKQQY
NQGNSSVSLTHTSKVSQICSVA
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcggggagtgagcacacatgcttgtgatcgtgtgcatatctgtgctaacctt
ttctcctacctgaatgacttagttttcccatgtcactgtttttatgatcgtatcgatgag
tctaagaatattaaaaaaaatatttttgtgcaggtaattgacttgagatggggtattctg
agcttgntagactccgatcacagaaacacacaactctctctggaggaaatcaaagcttgt
cagaaactgtcagctggtctcaccttcatcggactcctgggggaccactgtgggcaccag
cccgcgcctcggctcattgccaagaaggaatttgaggccctaactctgcagctgcccggg
gactctgcccagctcctgacacagtggtaccagcgggatgagaacacgttgcccgcctgc
tacgtgctgcagccggctgccgggcaggcctggcatcacctggagagacgcctggcatca
gcgctgtgcctggccgccctgaaggcagagaggtgcgggctgctggacccggagcagagg
caccgctaccacaaatcagtgattgcatgggagattgaacagggtctcctcaatacctgg
cagagcaacccaggggctttcgtattcctcagagaggttgaggatcccaacacacaaaat
ggacaagggacaaccagtgagctgttagaaaaagaggacaatctggacagtgaagcaaaa
cagctgcccagcaaccttaaagcaaaaatggcaagccattatcccgaacacctcaaagta
cacacactagcatgcagtaaagactccgggaaccctcagtgcaaggagaataataaatac
ctgaaacaactttgtgagcagttcactgctgtcgctaatcaccaggttttagagaatctt
cgatattgaggacagatcagtgaggagccagggcgacttctgcaggagctgagccaccac
gcagctctgtgcctgaagaactgcagattttcctgtgggagacagaatttactggataac
gtttttcactctgttaggcagaacaatgataaaacccacacaaccctcatcctttatggg
ccacctggctgtggaaaaacagctgtgatgtgcaaactctctgagcaggtgcaagctgtt
ttagggcaagacagcgtagttgtgattcatttgatggggacatcccagcgcagttctgcc
attcgcagcctgctgagggacatttgactccaagtgtgtttagcattcgatttgccaccg
cctccaacccagactaaacaagcttgcagtgatttggtcttgttcctcagtaaactcctc
ctcaccgtctcccactgtggcacacagacactggtgatgttcctggactctctggagaga
ttgcttcctggggatggtgctcacagattccactggctccctacagattgccctccanaa
gtccacattgtcatttccgtttccacaggagagcctgatactctgaaagctctccaacat
gctgtgcctgaggctgaagcgtacttcgaagtaggacccctatccagtgaggaaggtgag
gagatgctagagacgctcttagcgtcagacagatgacggctaagcccagctcaacaggcc
tattttcatcagagtttccctagtggcggtcaagccctgctcttcaagctggcctcccat
gaggccagaaaatgggcatcttacacttcaccttcagaactagtgattgctagcacagcc
cgggacgccactcaccgtctgtgcgagagactggaaaagtcacacggcacagtccttgtg
gctcacgtgcttggctatactgcttcctcacgaaatgggctgtcagacatggagctgaag
gacattttatcccttgacgatgaagctctctcagagatccaccactgccaccttccttca
agtaaaactatcctgcgccttcctcctctccactgggcacggctatgcagcgacctggga
gagcgcctggcagaacggaaggcagatggcttcacccttctttgtgttgcacacgggcaa
ttcgttgaaatggtgcagaatcgttccctgtcaaaacaagaccaaatcaagaggcatttt
ctcctggcagatttcttcaaggggacttggagctggggaatgaagaaacctcgtacattg
ccacaccttagcaggactttgaatgccgacaggaaggtagcccctcagcccctctggttc
tccgatactgttccaaatctgaggaagttgagtgaattgccatttcatttacttaatgct
ggacgaattgaggagctaaaccaggatgtgctggggaatatgaactggatcagctgtaaa
ataattgcctctggaatagagnntgttgttgatgactttgccatgtgtactgaatgcatc
ccttgtccagaactacgccttgtgcaggagacgcttctccttttgaagcctgcactcagc
agcgtacgcagccctgaaggagtgagtataatatacacagaaatgttggccaggcttctt
tctttcgtgccttcctacccggaggtaatcgggaagctgtgccagcagtgtctaagccgg
tgcagcgtctgtccctatcctgttctcattccactctgtggatttctccagccacctggt
gggcctctacacaccatgctcaccggattcctcgaaggcgtcacagtgatggcacttagt
tctgatcaccggctgctggtggcaggttcccaggacggctcaatgtttgtctggaatatg
gaagttcttgagatgctgcgtgtccttcctgggcactccgctgaggtgaggtgtgtgaaa
gtgtttggaaaagggacctctgctgtttcagctgccatggatcacagtctgcgcatccgg
aatttgatttctggcagagcaaggtttattatccgggatacgcatatcgaagaactgccc
tcacatcaccttcatgtggatgaggggcacatgattgtatattcttcctcagatactaag
gtcaatgcttggcacctggagacagcagaactcatcttccagatttctggagaggcgtca
gacgcatggatgttttctgcagtatttggcccacagctggtgattatgactgtgtccgaa
ggaggaacgctgagcctgtggaacagcaacactggcgagctgagatcaaaacgtcagctg
tcagggctacaggaagaaacaccaacatccagcgttctgatccagaagcaagggaagatg
atagtgggatttagtaggggatctctatccatgatctcttctgatggaaacagtctgctg
cagaagcttcctggaagggtttgctttgtggtggcatcagaagacgagtccattcttgct
gcaggctttgaggaatatgtgcgagtgtacctggcagactcaaagggattccacaggttc
ctagcagcagatttggaacacaaaggagcagttcaaacggctgttatctctgctggcaat
gacattatcattactggttctcaggctgcatctatccaggtgtggagtttagcagagcag
gggttgctgactgacacgctggatggcatgggagcaccagtaatgctcttagccctgtgc
gactgcactttggtgtctgcctcccacagcgcaccgcatctaagagtgtggaacctcatt
tacaaccatcagcagaaaaccttggtgcctgtcccaaatactggctgtgctgcactgtcc
cacggggggaactatgtctattttacccaacctgaagacacacataaagtcatcatctgg
gacgccacagaaggtgaagtgtgtgacacacaggacacctctgcccgagtgagatgcctg
gaaacagctgagcaaaaccagctccttttcatagggcttacgtctggaacagtccttgtc
tttcctctgaactccaggcgggatgtagcatgcatcccacctccagagtcacagaaacca
gtcaacaacatagcaatcaacaagcaggaaaagcagcttgccatagcacacgatgatttg
gtccttgtgctagatattatcgctgcagatccatgccctgtgattgacaggcccgcctat
acctttaaaacacagatccccggcactctgatttccagagtggttgtccttgcagattgc
agagtcctctacggcatgactaggggggacttattcctttatgactgccctcgggcccaa
gtgtttcctttgaaaagtcacagaagccagatctcctgtttggaaagcagccacggagag
cagcaggcactcagtggatctgaagattccctgcagtgtctctgggacttggagttctgt
cagcaggaacacgagatgtgctattataagcccacatccctcctgaaaggcatttgctgt
gcttgcttctcaaaagatgacaagtacgtgtacactggatcgctggatcaggccattaca
gtccgggatgttgcaagtggtgccttgctggctgtacagtgtatatacacaactgctctc
agaattgtgccaactgcagatggatttgtggcaacaacaaaagctggttgtgtaattcgt
gagcagtttcactgcccaaagaccacccctcctcggtataacccactccagaacatggtg
gcaacatgtacggtaaaatccagaaagaaagacaaggaaaactcaaggaagcaacagtac
aaccaaggaaattcttctgtgagcctgactcacaccagcaaggtctctcaaatctgctca
gtggcgtga
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integrated database retrieval system
