Rissa tridactyla (black-legged kittiwake): 128900815
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Entry
128900815 CDS
T09443
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128900815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128900815
04131 Membrane trafficking [BR:
rtd04131
]
128900815
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128900815
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128900815
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128900815
mRNA cycle factors
P-body specific factors
128900815
Membrane trafficking [BR:
rtd04131
]
Others
Actin-binding proteins
Myosins
128900815
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128900815
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128900815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
DUF4407
nSTAND3
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
128900815
NCBI-ProteinID:
XP_054038310
LinkDB
All DBs
Position
22:complement(5911779..5928833)
Genome browser
AA seq
1732 aa
AA seq
DB search
MAAGDPYVEGARVWIPDCAEVWRVAEITRGYKEGDTTLHLRLEDGSALAYPIELQLPPLC
NPDCLSGADDLVALSYLHEPAVLHSLRRRFLEANAIYTYCGIILVSINPYKPLPIYEEEV
IYAYSGHEMGDMDPHIFALAEEAYKQMVRFGKNQSLIISGESGAGKTVSAKYAMRYFTTI
GGCVGDSSMEEKVLASSPIMEAFGNAKTTRNDNSSRFGKYIKIGFSQAHVTGVTIKTYLL
EKSRVTFQAKAERNYHIFYQLCASATLPELQGLGLRGAESFHYTCQGSAAPSTNDAADLD
STRHAFSLLGVPEADQLELFSILAAILHLGNVVVRGRDRRGDGCFVEPADEALGLFCALL
GVEASQVMRWLCHRKLVTAGETYLKPLSRQQVLDSRDALAKHMYGQIFRWMVSRVNRALR
SLEGHHTSIGILDIYGFEMFELNSFEQFCINYANEKLQQLFNLHVFKLEQEEYVAEEIPW
VFIDFCDNQPCIELIEGRLGILDLLNEECKMPQGNDGSWAQKLYQTHVGSSHFQKPKRPT
DAFVVCHFAGKVEYQCDGFVEKNRDAVPEELVGLLRASKSALLTELFLEEGDGPVSLQSR
RSSGPRMAGRPSRRSLPSSQKNKNPTASQFTASLKRLMEMLGSTTSHYVRCIKPNDGKQP
FVFDSRRAVEQLRACGVLETIRISALGYPSRWTYQDFLERYRALVSREELRGADEKQICS
LALERLLQDPGKYQCGKSKVFFRAGQVARLEELRSRRLRVACVLLQRHLRGWLARRRFAR
ARAAAVCLQRHARGMLARRFARMLRRTRAAVTLQKTLRMVLARRSFLRTRQAVITIQAFA
RGMFARRLYQQMVWHQKAVVIQAAVRGWLARTRYTHLRGAVIYLQCCFRRVRARRELRRL
RLEARSVEHYKQLHKGMEIKVIQLQCRLDEQAQEKQRLVEQLSVVNAAHAEEVQRLRAEM
QQLREDVARDAQVQQLQERLAELERHRVKSCLRQEVEELKQRLAEVEAMKLQLGEEKNAL
IQRVLEQSQDLEEQHQRAARESQGLLQELEEERARYQSLVQEYARLEQGYENLRDEVAFQ
RQSTLRRSPSSESFLGSESSYLSSMSTAPSRDDSDQQAEGLEERWQLVPEGPQPGGEVLP
NGNVGQDPFEKVYLLLLKQLSAANEELARTREELRRSKAAVEPEEKKPLDFLKRRNLAEM
LGLGRSPEKGAVDDDLKHAYDAAQVANRLLASQLREEKQQHEEEVEGLHLNICSLKQLSQ
QQAALIQDLQRHQGQEGLQHHVLRLREENWELAQKLEKQERTTLKLQKQLRVYAKQIQEL
TVKREATGPVQELSASAVVLSRSLPVPSLAGPSQAMLAWRMEDEGHIIKAIITDYKPQSS
PGALPDLPAYILFLCFRHADHCRDEPRARSLLDAAINAIKRVMKKHSDDFDTVALWLANT
CRLLNCLRQYSQDESYSQGNTARQNEHRLQNVDPQSSCRGLGALAVQLYQQLIRTAEKRL
KPMIVAAMLESEPIQGLSSSCPPGHRRSSGAPAHTLPELLQQLGSFHAALGRHGLSPSVG
HQALRQLLFLISGTTLNYLLLRKDTCSWSRGIQLRYNISQLDQWLRAEGLQQSGAREVLE
PLVQAAQLLQVKKVTEEDAGALCSLCTVLSPQQVVKILRAYTPTAGLEERISPSFISSIE
KRLQAQYGGESSQLLVDTSHLFPVNLPFTPSPLHLDELRIPDALNLAFLIRL
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggacccatacgtggagggtgcccgggtgtggatccctgactgcgctgaa
gtctggagggtcgcggagataaccagaggctacaaggaaggagacaccactctccatctc
cgcctggaagatggctcggcactggcctaccccattgagttgcagctgccacctctctgc
aaccccgactgcctctcgggtgccgatgacctggtggccctgagctacctgcatgagccg
gccgtgctgcattcgctccgccggcgcttcctggaggccaacgccatctacacctactgt
ggtatcatcctcgtgtccatcaacccctacaagccgttgcccatctacgaggaggaggtg
atttacgcctacagcggccacgaaatgggagacatggatccccacatctttgctttggca
gaggaggcgtacaagcagatggtgaggtttgggaagaaccagtccctcatcatcagcggt
gagtcgggcgcggggaagactgtgtcagccaagtatgccatgagatacttcaccaccatc
gggggctgcgtaggtgactccagcatggaggagaaggtgctggcctccagccccatcatg
gaggcctttgggaatgcaaagacaaccaggaatgacaacagtagccgctttgggaagtac
attaagattggcttcagccaagctcatgtcacaggggtcaccatcaaaacctacctgctg
gagaagtcccgtgtcaccttccaggcgaaagcagagaggaactaccacatcttctaccag
ctctgtgcctcggccaccctgcccgagctccagggcctgggtcttcgtggggcagagtcc
ttccactacacctgccagggctccgctgccccgagcaccaacgacgcggccgacttggac
agcacgcgacatgccttctcgctcctgggtgtccccgaggctgaccagctggagctattc
agcatcctggctgccatcctgcacctgggcaacgtcgtggtcagagggagggaccgccgg
ggggatggctgcttcgtggagcctgccgatgaggccctagggctgttctgcgcactgctg
ggtgtggaggcatcgcaggtgatgcgctggctctgccaccgcaagctggtcactgctggc
gagacctacctgaagcccctctccaggcagcaggtgctcgactcccgggatgccctggcc
aagcatatgtacgggcagatcttcaggtggatggtgagcagggtcaaccgtgccctgcgg
tccctggagggccaccatacctccattggcatcctggacatctatgggtttgagatgttt
gagctcaacagctttgagcagttctgcatcaactacgccaatgagaagctgcagcagctc
ttcaacctgcacgtcttcaagctggagcaggaggagtatgtggccgaggagatcccatgg
gtcttcattgacttctgtgacaaccagccatgcatcgagctcatcgagggccggcttggc
atcctggacctgctgaatgaggagtgcaagatgccccaaggcaatgatgggagctgggcc
cagaagctttaccagacccatgttggcagctcccacttccagaagcccaagaggcccacg
gatgcttttgttgtctgccacttcgctggcaaggtggaataccagtgcgatgggtttgtg
gagaagaacagggacgccgtccccgaggagctggtggggctgctgcgagccagcaagtct
gccctgctcactgagctcttcctggaggaaggggacggccccgtatccctgcagtcccgc
aggtccagcgggcccaggatggctggtcgtcctagccgcagatcgctgcccagtagccaa
aagaacaagaaccccaccgctagccagttcacagcctccctgaagcggctgatggagatg
ctgggcagcaccacatcacactacgtccgctgcatcaaacccaacgatggcaagcagccc
tttgtgtttgactccaggcgagcagtggagcagctacgagcctgtggcgtcctggaaacc
atccggatcagtgccttgggctacccctccaggtggacataccaggacttcttggagagg
tacagggctctggtgagcagagaggagctgaggggcgctgatgagaagcagatctgcagc
cttgccctcgagaggctgctccaggaccccggcaagtaccagtgtgggaagagcaaggtg
tttttccgggctggccaagtggctcgcctggaggagctgcggtcccggcggctgagggtg
gcctgtgtcctgctgcagaggcacctgcgaggctggctggcccggagacgctttgcgcgg
gcacgggccgcggcggtctgcctgcagcgccatgcccggggcatgctggcccggaggttc
gccaggatgctgcgaaggaccagggctgctgtgacgctgcagaagaccctgaggatggtt
ctggcccgtcgttctttcctacggacgcgccaggctgtcatcaccatccaagcctttgcc
cggggcatgtttgcccggcgtctttaccaacagatggtgtggcaccagaaagccgtggtg
atccaggccgctgtgcgtggctggctggcccggacccgctacacccatctgcgtggggcc
gtcatctacctgcagtgctgcttccggcgggtgcgggcacgccgggagctgcggcggctg
cgcctcgaggcacgctcggtcgagcactacaagcagctgcacaagggcatggagatcaag
gtgatacagctgcagtgcaggctggatgagcaggcccaggagaagcagcggctggtggag
cagctctcggtggtgaacgctgcccatgccgaggaggtgcagcgcctgcgggcggagatg
cagcagctgcgggaggatgtggcccgtgacgcccaggtccagcagctgcaggagcggctg
gccgagctggagaggcacagagtgaagagctgcctgcgccaggaggttgaggagcttaag
cagcgcttggcagaggtggaagccatgaagctgcagctgggggaggagaagaatgccctg
atccaacgcgtattggagcagtcacaggatctggaagagcagcaccagcgagcggcgcgg
gagagccaggggctgctgcaggagctggaggaggagcgggcacgctaccagagcctggtg
caggagtacgcccgcctggagcagggctatgagaacctgcgggacgaggtggccttccaa
aggcaaagcaccttgagacgctccccgtcgtcagagagcttcctgggctccgagagcagc
tacttgtcctccatgtccacagctccctcacgagatgactctgaccaacaggctgagggg
ctggaggagcggtggcaactggtgccggaggggccacagcccggcggtgaggtgctgcca
aatggcaacgtgggccaggatcccttcgagaaggtgtaccttctcctcctgaagcagctc
agtgctgccaacgaggagctggcccggacccgggaggagctgcggagatccaaggctgct
gtggagccggaggagaagaaaccattggacttcctcaagcgcaggaacctagcggagatg
ctggggctgggcaggagcccggagaagggggcggtggatgatgacttgaagcacgcatac
gatgcggcgcaggttgccaataggctgctggcgagtcaactgcgggaggagaagcagcag
cacgaggaggaggtagaagggctgcacctcaacatctgctccctcaagcagctgagccag
cagcaggcagccctcatccaggacctgcagcggcaccagggccaggaggggctgcagcac
cacgtcctgcggctcagggaggagaactgggagctggcccagaagctggagaagcaggaa
aggaccacgctgaaactccagaagcagctgagagtctatgccaagcagatccaggagctc
acagtgaagagagaggctactgggccagtgcaggagttgtcagcatctgctgtggtcctg
tcccggtccctcccggtcccatccctggctgggccgtcccaggccatgctagcgtggcgg
atggaggatgaagggcacattatcaaggccatcattacagactacaaaccgcagagcagc
cccggggcgctcccagacctgccagcctacatcctcttcctctgcttccggcatgcggac
cactgccgtgatgagccccgggcccgctcgctcctggatgcggccatcaatgccatcaaa
agggtcatgaagaagcacagcgatgactttgacacggtggcactctggcttgccaacacc
tgccggctcctgaactgcctgcgccagtacagccaggatgagagctactctcaggggaac
acagcgcggcagaacgagcatcgcctgcagaacgtggacccccagagctcctgccgcggc
ctgggtgccctggctgtccagctctaccagcagctcatccgcaccgccgagaagcgtctc
aaacccatgattgtcgctgccatgttggagagtgagcccatacagggcttgtcctcctcc
tgccctcctggccaccgccggtcctcaggagcccctgcccacaccctgcctgagctgctg
cagcagctgggctccttccacgcggcactgggccgccatgggctgtcccccagcgtggga
caccaggccctgcgccagctcctcttcctcatcagcggcaccaccctcaactacctcctg
ctgaggaaggacacatgctcctggagccggggcatccagctcaggtacaacatcagccag
ctggaccagtggctgcgggcagaggggctgcagcagagcggggcccgtgaggtgctggag
cccttggtccaggctgcccagctgctgcaggtgaagaaggtgacggaggaggacgctgga
gctctctgcagcctgtgcacggtgctgtcaccccagcaggttgtgaagatcctccgggct
tacaccccgactgccgggctggaggagcgcatcagccccagcttcatcagcagcattgag
aagcggcttcaggcacagtatggaggggaatccagccagctcctggtggacaccagccac
ctcttccctgtgaacctgcccttcaccccctcccccctgcacctggatgagctccgcatc
cctgatgccctcaacctggccttccttatccgcctctga
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integrated database retrieval system
