Rissa tridactyla (black-legged kittiwake): 128900932
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Entry
128900932 CDS
T09443
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128900932 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
128900932 (SNX27)
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Others
Others
128900932 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
rtd04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128900932 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
Dickkopf_N
TetR_C_26
RA_3
Motif
Other DBs
NCBI-GeneID:
128900932
NCBI-ProteinID:
XP_054038597
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All DBs
Position
23:complement(2432972..2465118)
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AA seq
553 aa
AA seq
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MADEEGEGLPRSAAAAQRNGGGEGAPGGPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRS
INGELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELI
LTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAG
RQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSI
RVIGESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVG
MDSITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVL
LNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIF
PHCSCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFE
YARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATGKDNKNCSKDNMCSKNI
FQMVRSQQRDAAT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggcgaggggctgccgcgctcggcggcggcggcgcagcggaacggc
ggcggggagggggccccggggggcccgggcgggccccgcgtcgtccgcatcgtcaagtcg
gagtccggctacggcttcaacgtccgcggccaagtgagcgagggcggccagctgcggagc
atcaacggcgagctctacgccccgctgcagcatgtcagcgccgtgctgggcggcggggcg
gccgaccgcgccggggtgcgcaagggggaccgcatcctggaggtgaacggggtgaacgtc
gaaggagcgacgcacaagcaagtggtggacctgatccgcgcaggagagaaggagttgatc
ctgacggtgttgtcggtgcctccccacgaggcagacaatctggatcccagcgatgactct
ttggggcagtcgttctatgactacacagaaaaacaagccgtgcccatctccatccccacc
tacaagcacgtggagcaaaacggcgagaagtttgtggtctacaatgtttacatggcgggc
cgccagctctgctccaagcggtaccgggagtttgccatcctgcaccagaacctgaaacgg
gaattcgccaacttcacttttccacgtctcccggggaaatggcccttctctttgtcagag
cagcagctggacgcccggcggcgagggctggaagagtacctggagaaagtgtgttcgata
cgcgtcattggggagagcgacatcatgcaggagttcctctcggagtcggacgagaattac
aacggcgtctcggacgtggagctccgggtagcgctaccagatataacgacagtgacagtc
agagtcaaaaagaacagcactacagaccaggtctaccaggctgtggctgccaaagtcgga
atggacagtattaccgcaaactacttcgccttgtttgaagtgatcaatcactcctttgtg
cgcaaactggcgcccaacgaattcccccacaaactctacgtgcagaattacacctcggcg
gtgccgggaacgtgcctgaccatccggaaatggctcttcactacagaggaggaggttctt
ctcaatgacaatgacctggcggtcacctacttcttccatcaggctgttgatgacgtcaag
aaaggctacatcaaagcagaggagaagtcctaccagttacagaagctgtgtgagcagaga
aagatggtcatgtatttaaacatgttacggacgtgcgagggttacaacgagatcatcttc
ccccattgctcctgtgactctcggcggaagggacatgtgatcacagccatcagcatcaag
cactttaaactccacgcctgcaccgaggaggggcagctggagaaccaggtaatagcattc
gaatgggacgaaatgcagcggtgggacacggacgaagagggaatggcattttgttttgaa
tacgcacgaggagagaagaaaccccgatgggttaaaatcttcaccccctatttcaactac
atgcacgagtgcttcgaacgggtcttctgcgagctcaagtggaggaaggaggtggaggag
gaagcaacaggcaaggataacaagaactgcagtaaagacaatatgtgcagcaagaacatc
tttcagatggtcaggtcacagcagagggacgcggccacttag
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