Rissa tridactyla (black-legged kittiwake): 128900933
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Entry
128900933 CDS
T09443
Symbol
ITGA10
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-10
KO
K06586
integrin alpha 10
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
rtd04810
Regulation of actin cytoskeleton
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128900933 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128900933 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128900933 (ITGA10)
04810 Regulation of actin cytoskeleton
128900933 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128900933 (ITGA10)
Cell adhesion molecules [BR:
rtd04515
]
Integrins
Integrin alpha subunits
128900933 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
VWA_2
GAE_BBS1
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
128900933
NCBI-ProteinID:
XP_054038599
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All DBs
Position
23:complement(2912489..2929655)
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AA seq
1164 aa
AA seq
DB search
MEGGGCRRLLRVLLLLPGLCLGFNVDVRRPRVFPGPAQGQFGYKVLQRASGGDKWLLVGA
PWDGDRQGDIYKCRVGPPNATCAKANLGSAAPWLVPLPGHSVHLGMTLLDSKDGGFVACA
PLWSQECGTSLYSTGLCARLDGDLRPVGTVAPTAQRCSTYMDIVIVLDGSNSIYPWYEVQ
NFLSNVLSKFFIGPGQIQVGVLQYGERAVQEWALGRYRTAQEVVEAAKNISRQEGRETRT
ALAIHRACTEAFSPEQGGRADATRLMIVVTDGESHDGEELPEALAECEKRNVTRYAIAVL
GHYLRRQQDPEDFIREIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGYNE
SSFELEMSQIGFSIHLLEDGILFGTVGAYDWDGAVLEESRRGRIIPPRKAFQKEFPLELK
NHAAYLGYAVSSLRLLGGQRLYVAGAPRFQHKGKVILFQMDTTGTVTVAQALTGEQIGSY
FGSEVCVLDVDGDGVTDVLLVAAPMYLGAQSRETGRVYLYRVGQRLLAPAGTLHADKKPQ
DARFGYALAAVPDLNHDGFNDVVVGAPLEDGHRGAVYVYHGAPGTLLPHYKQRIEAAALG
PTLSYFGRSLDGRLDMDGDGLVDLAVGAQGAAVLLRSRQIVQVNTSLTVEPPAINVIQKN
CQRSGTGAVCLRARVCFRAGTRARGQRDRDIELRYNVSLEERTPGARAAFDSGARRLLQR
RLELSLGRQSCLRFPFHVLDTTDYLRPLSFTVRLAMAESTGPVLDETSPTTIRKLIPFFK
DCGEDDECVTDLVVRATMDIVGSRQRPHVLRKGRRKVMVDVVLENKKENAYNTSLLLRFS
SNLHFSSLALQDTSSVKLECTALAGHRRLCSVGYPVFRSLAKVSFTLELEFSCSVLLDRA
EVALEASSDSTEATPEDNALRLSAPIRYEPDLFLSSDANLHRYEVHPLGTFPHGPGPEFK
TTVKVQNLGCYPVRNLTLLMALPALGYRRATFLSVTRVLADNATCTLRTPPEEPRQRGTA
TVVPVHPEDLLRVDRLDCANAWCQELSCRLGRLDRGGEASIHVLRAIHNDFFRGAKFRSV
RVVSTVWLGVPGSSVLVLEEGAHRREVVLEIIQAKRVPVSLWILVGSILGGLLLLALIIF
CLWKLGFFTRKKLPEEEEEEKEEQ
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggtgggtgccggcggctcctccgggtgctgctcctgctcccagggctgtgc
ctggggttcaacgtcgacgtgcggcggccgcgggtcttccccgggccagcccagggccag
tttggctacaaggtgctgcagcgggcgagcggcggggacaagtggctgctggtgggggcc
ccgtgggacggggaccgccaaggtgacatctacaagtgccgcgtgggaccccccaacgcc
acctgcgccaaagccaacctcgggtccgcagccccttggctcgtccccctccccggccac
agcgtccacttggggatgaccctcctggactccaaggacggcggcttcgtggcttgcgcc
ccgctttggtcccaggagtgcggcacctccctctacagcaccggcctctgcgcccggctg
gatggtgacctccggccagtggggaccgtcgcgcccacggcccagcgctgctccacctac
atggacatcgtcatcgtcctggacggttccaacagcatctacccctggtacgaggtgcag
aacttcctcagcaacgtcctcagcaagttcttcatcgggccggggcagatccaggtgggg
gtgctgcagtacggggagcgggcggtgcaggagtgggcgctggggcggtaccgcacggcg
caggaggtggtggaggcggccaagaacatcagccggcaggagggcagggagacgcgcacg
gcgctcgccatccaccgcgcctgcactgaagccttcagccccgagcagggcgggcgggcg
gatgccacccggctgatgatcgtggtgacggacggggagtcccacgacggcgaggagctg
cccgaggctctggccgagtgcgaaaagcgcaacgtcacccgctacgccatcgcggtgttg
gggcactacctccgccggcagcaggaccccgaggatttcattcgcgagatcaagtacatc
gccagcgacccggatgagaaatacttcttcaacgtcaccgacgaggccgccctcaacgac
atcgtggatgccttgggtgaccgcatcttcagcctggaaggcacccacgggtacaacgag
agctccttcgagctggagatgtcccagatcggcttctccatccacctcctggaggacggg
atcctcttcggcacggtgggagcctacgactgggacggggccgtgctggaagagagccgg
cgcggccgcatcatcccgccccgcaaagccttccagaaggaattcccgttggagctgaag
aatcacgcggcttatttgggttacgccgtctcctcgctgcggctcctcggggggcagcgc
ctgtacgtggccggggccccccgcttccagcacaagggcaaggtgatcctcttccagatg
gacaccacggggaccgtgacggtggcccaggcgctgacaggggagcagatcggctcctac
ttcggcagcgaggtgtgcgtcctggacgtggacggcgacggggtcaccgacgtgctgctg
gtggcagctcccatgtacctgggtgcccagagcagggagacggggagggtgtatctctac
agagtggggcagaggctcctggcccctgccggcaccctgcacgccgacaagaagccgcag
gatgcccggttcggctacgccctggccgccgtgcccgatctcaaccacgacggtttcaat
gacgtggtggtgggggctccgctggaggacgggcaccgcggtgccgtctacgtctaccac
ggcgccccgggtaccctcctgccccattacaagcagcgcatcgaggcggcggcgctgggt
ccgaccctcagctatttcgggcgcagcctggacgggcggctggacatggatggggacggg
ctggtggacctggccgtgggggcgcagggggcggccgtgctgctgcggtcgcgccagatc
gtccaggtcaacacgtcgctgacggtggagccaccggccatcaacgtcatccagaagaac
tgccagcgcagcggcaccggcgccgtctgcctccgggccagagtctgcttccgtgctggg
acccgcgcccggggccagcgggacagggacatcgagctccggtacaatgtgtccctggag
gagaggacgccgggagcccgggctgccttcgactccggcgcccggcggttgctgcagcgt
cgcctcgagctctcgctggggcggcagagctgcctccgcttccccttccacgtcctggac
accacggactatctgcgacccctcagcttcacggtgaggttggccatggccgaatccacc
ggcccggtgctggatgagacgtcccccaccaccatccggaaactgatccccttcttcaag
gactgcggggaggatgatgagtgcgtcacggacttggtggtcagggccaccatggacatc
gtgggctccaggcagagaccccacgtcctgcgcaagggcaggaggaaggtgatggtggat
gtggtcctggagaacaagaaggagaacgcctacaacaccagcctgctcctccgcttctcc
agcaacctccacttctccagcctcgcgcttcaggacaccagctcggtgaagctggagtgc
acggcgctggcaggtcaccgtcggctctgcagcgtcggctaccccgtcttccgctcactg
gccaaggtctccttcaccctggagctggagttcagctgctccgtcctcctcgaccgagcc
gaggtcgccctcgaggccagcagtgacagcaccgaggcgacgccagaggacaacgcgctc
cggctttctgcccccatccgctacgagcctgacctcttcctctccagcgacgccaacctg
caccgctacgaggttcaccccctcggcaccttcccccacggccctggccccgaattcaag
accacggtgaaggtgcagaatttggggtgctacccggtccgaaacctcaccctcctcatg
gccctgccagccctgggctaccgccgcgccaccttcctctccgtcacacgcgtcctggcc
gataacgctacctgcacgctgcggaccccccccgaggagccgcggcagcggggaacggcc
acggtggtcccggtgcaccccgaagacctcctgcgcgtggacaggctggactgtgccaac
gcctggtgccaggagctgagctgccggttggggcggctggaccgcggcggggaggcctcc
atccatgtcctccgcgccatccacaacgacttcttccgtggggctaaattcaggagcgtg
agggtggtcagcacggtctggctgggggtcccggggagcagcgtgctggtgctggaggag
ggggcgcatcggagggaggtggtccttgaaatcatccaggcgaagcgggtgcccgtctcc
ctctggatcctggtgggcagcatcctgggggggctgctcctcctggccctcatcatcttc
tgcctgtggaagctgggcttcttcacccgcaagaagctccccgaggaggaggaggaggag
aaggaggaacagtga
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integrated database retrieval system
