Rissa tridactyla (black-legged kittiwake): 128901047
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Entry
128901047 CDS
T09443
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128901047 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128901047 (PRPF3)
Spliceosome [BR:
rtd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128901047 (PRPF3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
128901047
NCBI-ProteinID:
XP_054038770
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All DBs
Position
23:1081909..1095121
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AA seq
684 aa
AA seq
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MSLSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVE
DEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVE
HPAQLNPPVDSDMPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRIS
NLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQ
GVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML
HRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMARE
HFKKHGAEHYWDLALSESVLESTD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctccaaaagggaattggatgagctgaaaccatggatcgagaagacagtgaag
cgagtcctggggttctcggagcccaccgtggtcacggcggcactgaactgcgttgggaag
ggcatggacaaaaagaaagcagctgaccacctcaaaccctttctcgatgattccaccctg
cgatttgtggacaagctctttgaggcggtggaggaaggccgaagctccaggcactccaaa
tccaacagcgaccggaaccggaagcgagagctgaaggatgtgtttggtgatgactctgag
gtatccaaggaatcttccggcgtcaagaagcggcgcataccgcgatttgaggaggttgag
gatgagcctgaggtcataccaggacccccgtcagagagccctgggatgctgaccaagcta
cagatcaaacagatgatggaagcagccacccggcagatcgaagagcggaaaaagcagctg
agtttcatcagtcctccgacaccacagccaaaaatttcttcttcatcccaatcggaacga
ctccccattggcaacaccatccagccctcccaggcagcgacgttcatgaatgatgccatt
gagaaggccaggaaagctgcggagctgcaggcccgaatccaggctcagctggccttgaaa
ccagggctcatcggcaacgccaacatggtggggctggccaacctgcacgccatggggatc
gcgccgccgaaagtggagctgaaggatcagacaaagcctacgccgctgatcttggatgag
caaggccgaactgttgatgcgactggtaaagagattgagttgactcaccgcatgccaacc
ctaaaagcaaacatcagagctgtgaagagagagcagttcaaacagcagcttaaagaaaag
ccctcggaagatatggagtcgaacacttactttgacccccgcgtctccataaccccagcc
cagcgtcagaaacgcacctttaagttccatgaaaaaggcaaatttgagaaaattgcccag
aggttgcgaacgaaggctcaactagaaaaactgcaggcagagatctcgcaagccgccagg
aagacagggatacacacttccaccaagttggctcttattaccccaaagaaggagctgaaa
gagggggagatcccagagatagagtggtgggactcctacatcatccctaacggccttgac
ttaaaaggtggaacgtcttcaaagagagacgagtacttcgggatcacaaacctcgtggag
cacccagcacagctcaaccccccagtggacagtgacatgccagtgaccctgggcgtttat
ttaactaagaaagagcagaagaaattacggcgacagactcggagagaagcccagaaggag
ctgcaagagaaagtcagactgggcctgatgccaccaccggagcccaaagtaagaatttca
aacctgatgcgagtactgggaacggaagctgttcaggacccaacaaaagtcgaagctcac
gttagagcgcagatggcaaagagacagaaagctcatgaagaagcaaacgctgcgagaaag
ctcacagcggaacagcgaaaagccaagaaggtgaaaaagctgaaggaagacgtttcacag
ggagttcacatagctgtgtacagggtcagaaacttgagcaacccagcaaaaaaattcaaa
atcgaggcaaacgctggccagctgtacttaacaggcgtggtggttttacacaaagacgtc
aacgtggtggtggtagaaggaggcccgaaagcacagaagaagttcaaacgtcttatgctt
catcgaataaaatgggatgagcaaacatcgaacacaaagggagaggatgatgatgagtcc
gacgaggagtctgttaagaaaacaaacaaatgctctctggtttgggagggcacagcgaag
gaccgcagcttcggtgaaatgaaatttaagcagtgccccacggagaacatggcacgggag
cactttaaaaagcacggcgccgagcactactgggacctggcgctcagcgagtcggtgctg
gagtccacggactga
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