Rissa tridactyla (black-legged kittiwake): 128901228
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Entry
128901228 CDS
T09443
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128901228 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128901228 (SMARCD1)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128901228 (SMARCD1)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128901228 (SMARCD1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128901228 (SMARCD1)
PBAF complex
128901228 (SMARCD1)
GBAF(ncBAF) complex
128901228 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SusD_RagB
Motif
Other DBs
NCBI-GeneID:
128901228
NCBI-ProteinID:
XP_054039039
LinkDB
All DBs
Position
24:complement(2014990..2023095)
Genome browser
AA seq
512 aa
AA seq
DB search
MAARAGFQSVTPSGGGGGAAAGAGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGM
LPGSRLAPQGPSMGPPGYGGSPAVRPGMAQASLDQARKRPAPQQLQQVQPQAVPNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggattccagtcggtgactcccagcggcggcggcggtggggccgct
gctggggccggcgcgctaggcccgggcacgccgggcgggccggtgcgcatgggcccggct
ccgggccagggcctgtaccgctcgccgctgccgggagccgcctacccgcgccccgggatg
ttaccgggcagccggctggcgccccagggcccctccatggggccgccgggttacggcggg
agcccggcggtgcggcccgggatggcgcaggccagcctggaccaggcccgcaagaggccg
gcgccgcagcagctccagcaggtgcagccgcaggccgtgcccaaccgcaaccacaacgct
aaaaagaagaagatggctgacaaaattctacctcagaggattcgtgaactcgtacccgag
tctcaggcctatatggacttgctggcctttgaaaggaaattggaccagacgattatgagg
aaacgcttggatatccaggaggctttgaagcgacccattaagcaaaaacgaaagctacgt
atttttatctccaataccttcaatccagccaagtcggatgcagaggatggtgaaggaaca
gtcgcctcctgggagcttcgggtggaaggacggctgctggaagattctgctctgtccaaa
tatgatgccaccaagcagaaaagaaagttctcatccttctttaaatctctggtcattgaa
cttgataaagacctctatggccctgacaatcacctagtagagtggcacaggactgctaca
actcaggagacggatggcttccaggtgaagaggccaggagatgtaaatgtgcgctgtact
gtccttctgatgctggattaccagcctccccagttcaaactggatccccgcttggctcgt
ctcttggggattcacactcagacccgtccagtgatcatccaggctttgtggcaatatatc
aagacccacaagctccaggacccccatgagcgggagtatgtcatctgtgacaaatacctc
cagcagatatttgaatctcagcggatgaagttctctgaaatcccacaaagacttcatgcg
ttgcttatgcccccagaaccgatcatcattaatcatgtgatcagtgttgacccaaacgac
cagaagaaaacagcttgctatgacattgatgtggaggtggacgataccttgaaaacccag
atgaattccttcctgctctccacagccagtcaacaggaaattgctgctctggataacaag
attcatgaaacaatagagacaattaaccagctgaagacccagcgggagttcatgctgagc
tttgcccgagatcctcagggcttcatcaacgactggctacagtcccagtgccgggattta
aagacaatgactgatgttgttgggaatcctgaagaggagcgtagagctgagttctacttc
cagccatgggctcaggaagctgtgtgcagatacttctactccaaggtgcagcaaagacgg
caggaattggagcaggctctgggaatccgtaacacatag
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