Rissa tridactyla (black-legged kittiwake): 128901264
Help
Entry
128901264 CDS
T09443
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128901264 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128901264 (GLI1)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
128901264 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_17_2
DUF7565
Motif
Other DBs
NCBI-GeneID:
128901264
NCBI-ProteinID:
XP_054039110
LinkDB
All DBs
Position
24:complement(1479909..1500081)
Genome browser
AA seq
1302 aa
AA seq
DB search
MFNPVSAPAAGYAEHCCLRPPHGPAPAAPGPQGLDFPLCQQSNLMSSPRGYGLVPGAEHP
GSGDGSRFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASAGGS
YGHLSISTISPSVGYQSPPRQQKGQGHLYSHTPPPPPCSSHEHPSTRPGLLHHAPARGTL
KHCQQLKLEWSLSSPLTVRYPEERSECDISSPASTGTQDPLLGMLDVREDLEKEDGKPES
ETVYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLV
VHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRA
KHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVVPGRALPT
PSGPPDMKQEKDTNGPTEARKDDGKLLVPDLALKPQPSPGGQSSCSSDHSPLGSTTNNDS
GVEMAGNAGGSYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQMRKPSATNSLNL
PAIPGAGLPGEVPGVSVPPPAASHRRVAELSAAEMGMPLNERRSSATSTVSSAYTVSRRS
SLVSPYLAGPCLGGEAGALPGGAGLADGYDPISPDASRRSSDASHCGGLPGVGSLTLAQR
YRLKAKYAAATGGPPPTPLPSRERVGMGGPSSLPGDHLGPAEPCYLANGLLRRHSSNDYP
GYAGSVPPHLVPRNGVRRASDPARTTANPHAVPKVHRFKSMGNVNVPGVGRTALQPLGGS
DANLQRHVFSPRPPSISENVFLESVSIEGPGPGTDSGLLEMEQYLNYPEESFPCQGTGVE
LQCEGLYGSTHRTTAGVQLNPGGHGDMEEGLLQSEFSLPQCQMNQHFTSMHAGNRTMPAT
WDEPLQGNLEMSSGQPSVSASAAAMSGPHCHHQSTEYPLPSSCGQQPKLVSSCQDSGFSG
RHRLNRLQIKSEQRYPAPAPALAPCQNTKLAGPVQPPASFGQAVNVGPGGYQAEEQAPVG
YVGMLSPGGRRAQTPTTQTKEVMVRSYVQAQQALMWGDQLASKGGEAGMGPGSEPGQCQA
MQAPLYLSPKYSGYQAKPDHLQGLAETPHLLNAPCFNPEMVPHPPGGPKPPGHQNSLNYA
GNLPPPSHSYEGVEASSRRVLRLPPARPTPEGPGNTLLYYPGQGTHLQVGKGGQKLLGQT
AASCGGPGHYGGSLEGLKGSSYYYPDSGERVANSLDSLDLENTHLDFAAIVEDAETAALP
GPPSPAGGLLLPASGGANMAVGDMSSMLSTLAGESHFLNSLC
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccctgtcagcgccccggccgccggctacgccgagcactgctgcctgcgcccg
ccgcacggaccggccccagctgccccggggccacaaggacttgatttccccttatgccag
cagtcaaacctcatgagcagtccccgcggttatgggttggtgccaggagccgagcaccca
ggcagtggtgatggctcacggttctcaacgccccgtggtgcaggcaaactgggcaagaag
cgggccctgtccatctcacccctgtcagactctagcattgacctgcagacggtaatccgc
acctcacccaactccctcgttgcattcatcaactcccgctgcgcctctgccggtggctcc
tatggccacctctccatcagcaccatcagtccatcggtggggtaccagagtccaccgcgt
cagcagaagggccaaggccacctgtacagccacaccccaccaccaccaccatgtagttcc
cacgaacacccgtccacccgcccggggctcctgcaccatgccccagctcgtgggaccctc
aaacactgccagcagctaaagttggagtggagcctgagcagccctctgactgtcagatac
ccagaggagagatccgaatgtgacatctccagtccagcttccacaggcacccaggacccc
ttgctggggatgctcgatgttcgtgaagatctggagaaggaagatgggaaacctgagtct
gagactgtgtatgaaaccaattgctactgggacggctgtgccaaggagttcgatacgcag
gagcagctggtgcatcacatcaacaatgagcatatccatggggagaagaaggagtttgtg
tgccactgggcagcgtgttcccgggagcagaggccattcaaggctcagtacatgttggtg
gtccacatgcgacgtcacacaggcgagaaacctcacaaatgcacgttcgagggctgtaac
aaggcctactcacgcctggagaacctcaagacgcatctacgctcacacacgggtgaaaaa
ccctacgtgtgtgaacacgagggttgcaacaaggccttctccaatgcttctgaccgggcc
aagcatcaaaaccgtacccactccaatgagaagccctacgtgtgcaagattccaggctgc
accaagcgctacacagaccccagttccctgcgcaaacatgtgaagacggtgcatggtccc
gatgcccatgtcaccaagaagcaccgaggggatgtcgtgccaggccgtgcacttcccacc
cccagtgggcccccggacatgaagcaggagaaagacacaaatggccccacggaggccagg
aaggacgatggcaaactcttggtgcctgacttggccttgaagccgcagcccagcccaggc
gggcagtcctcctgcagcagcgaccactccccgctcggcagcaccactaacaacgacagt
ggggtggagatggcgggcaacgcgggtgggagctacgaggatctgtccacactggaggat
gtggtgcccggtgagcccatgggtacctcagggctcatggccctccacaagctagaaaat
cttcggattgacaaactgaagcagatgaggaagccatcagctaccaacagcctgaatttg
ccagccatccctggagccggcctgcctggggaggtgcccggcgtctccgtgccaccaccg
gctgcctcgcaccggcgcgttgcagagctgtcagcagcagagatgggcatgccgctgaac
gagcgccggagcagcgccaccagtaccgtaagctcagcctacacggtgagccggcgctcg
tccctggtgtccccgtacctggctgggccgtgtctgggcggcgaggcaggggcactgccc
ggcggggcaggcctggcagatggctatgaccccatctctccggacgcgtcacgacgctcc
agcgatgccagccactgcggggggctgccgggtgtgggcagccttaccctggcccagcgc
taccgcctcaaggccaaatacgctgcagccacaggtggcccccctccaaccccgctgccc
agcagggagcgggtgggcatgggtggccccagcagcttacctggggaccaccttgggcca
gctgaaccctgctaccttgcaaacggtttgctgcgaaggcacagttccaatgactaccct
ggctacgcaggcagtgttccccctcacctggtgcctcggaatggtgtgcggcgggccagc
gaccctgcccggaccacggccaaccctcatgctgtgcccaaggtgcatcgttttaagagc
atgggtaacgtgaatgtgccaggagtgggcagaactgctctgcagcccttgggtggttct
gatgccaaccttcagcgccatgtcttctccccacgcccacccagcatcagtgaaaacgtc
ttcctggagagcgtgagcatagagggccctggcccaggcacagactctggcttgctagag
atggaacagtacttgaactaccctgaggaaagcttcccatgccaggggacaggtgtggag
ctccagtgcgaaggcctctatggcagcactcaccggaccacggcgggtgtgcagctgaac
ccaggagggcacggggacatggaggaggggttgctgcagtccgaattctccctgcctcag
tgccagatgaaccagcacttcacaagtatgcatgccggcaacaggaccatgccagctact
tgggatgaacctctccaaggcaatctggaaatgagttctgggcagccaagtgtcagtgcc
tctgctgctgccatgtctgggccacactgtcaccatcaaagtactgagtacccactaccc
agttcttgtgggcagcaacccaaacttgtgagctcgtgccaggacagtggattttctggg
aggcaccggcttaaccgactacagatcaaatctgagcagcgttacccagcacctgcccca
gcacttgctccctgccagaacactaagcttgctgggcccgtgcagcctcctgcatcattt
ggccaagccgtgaatgtagggcctggtggttaccaggctgaggaacaggcgcctgtcggt
tacgtgggcatgttgagcccggggggtagaagagcccagacccccaccacgcagaccaaa
gaagtgatggtccgtagctacgtgcaggcccagcaggctctgatgtggggagaccagcta
gcatccaaaggaggggaggccggcatggggccgggcagtgagcctgggcagtgccaagcc
atgcaagcaccactgtacctcagccccaagtactctggttaccaggccaaacccgatcac
ctgcagggtctggcagagaccccacacctcctaaatgccccatgcttcaacccagagatg
gtgccacaccctcctggtggccctaagccacctggtcaccaaaacagtctgaactacgcg
ggcaacctgcctccgccaagtcattcctatgagggggtggaagccagctcccggcgtgta
cttcgcttgccccctgcccgccccacacctgaggggcccggtaacaccctgctgtattac
ccaggccagggcacacatctacaggtgggcaaaggtgggcagaagctgctgggccaaacg
gcagccagctgtgggggtcccgggcattatggtgggagcttggaaggactcaaaggcagt
tcatattactacccagattcaggggagcgggtggccaacagcctggactccctggacctg
gagaatacgcaccttgactttgctgccattgtggaagatgcagagacggctgcgctgcct
gggcccccgagcccggcggggggcctcctcctgcctgcgtctggtggtgccaacatggct
gtgggcgacatgagctccatgttgagcactctggcaggggagagccatttcctcaactcc
ctgtgctaa
DBGET
integrated database retrieval system
