Rissa tridactyla (black-legged kittiwake): 128901328
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Entry
128901328 CDS
T09443
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00260
Glycine, serine and threonine metabolism
rtd00630
Glyoxylate and dicarboxylate metabolism
rtd00670
One carbon pool by folate
rtd01100
Metabolic pathways
rtd01200
Carbon metabolism
rtd01230
Biosynthesis of amino acids
rtd01240
Biosynthesis of cofactors
rtd04981
Folate transport and metabolism
Module
rtd_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128901328 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128901328 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128901328 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128901328 (SHMT2)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128901328 (SHMT2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Coat_F
Motif
Other DBs
NCBI-GeneID:
128901328
NCBI-ProteinID:
XP_054039240
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Position
24:complement(1600529..1605254)
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AA seq
501 aa
AA seq
DB search
MWPLRLGRALQRCGGLVATGSQRAQHGTAAAAATGHMPSWTGQESLAESDPEMWTLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRA
LEAFDLDPACWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDIKRI
SATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLIIAGTSAYARLIDYARMKKVCEE
VKAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKT
GKETLYDLEDRVNFAVFPSLQGGPHNHAIAAVAVALKQASSPAFRQYCQQVLKNAKAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFREEDFQKVVAFIDEGIALALDVKSKTSKLQEFKTFLLRDAETQRRLA
DLRQRVETFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcagggccctgcagcgatgtggtggcctggtggccaccggc
agccagcgggcgcagcacggcaccgctgcagcggctgccacggggcacatgcccagctgg
acggggcaggagagtctggccgagagcgaccccgagatgtggaccctggtgcagaaggag
aaggaccggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggcg
gcactggaagccctgggctcctgcctcaacaacaagtactcggaggggtaccctggcaag
aggtactacgggggggccgaggtggtagaccagatcgagctgctgtgcgagcagcgggct
ctggaggcgtttgacctggatcctgcctgctggggcgtcaacgttcagccctactcgggg
tctccagccaacttcgccgcctacacagcgctgctgcagccccacgaccgcctgatgggg
ctggacctgcccgatgggggccacctcacacacgggtacatgtcggacatcaagagaatc
tcggcaacgtccatcttcttcgagtcgatgccctacaaacttgatccagccacggggctg
atcgactacgaccagctggaggtgacggcgcggcttttccgtcctcgtctcatcatcgct
ggcaccagcgcctacgcccgcctcatcgactacgctcgcatgaagaaggtgtgcgaggag
gtgaaggcgtacctgctggcggacatggcgcacatcagtgggctggtggcagccaaggcc
atcccttcgcccttcgagcacgcggatgtggtaaccagcaccacgcacaagaccctgcgt
ggcgccaggtcaggactcatcttctaccgcaaaggcgtgcgctcggtagacaagaagacg
ggcaaggagaccctctacgacctggaggacagggtcaactttgccgtcttcccctccctg
caaggggggccccacaaccatgccatcgctgccgtggctgtggccctcaaacaggccagc
tcgccagctttccgccagtactgccagcaggtgctgaagaacgccaaagccatggcacag
gccctgctgcagcgcgggtacaccctggtgtcaggtggcaccgacaaccacctggtgctg
gtggacctgcggcccaagggcatggacggcgcgcgggctgagcgggtgctggagctcgtc
tccatcactgccaacaagaacacgtgcccgggggacaagagcgcgctcacgccagggggg
ctgcgcctgggtgcccccgccctgacttcccgccagttccgcgaggaggatttccagaag
gtggtggctttcatcgacgagggcatcgcgctggccctggacgtcaagagcaaaaccagt
aagctccaggagttcaagaccttcctgctgcgggacgcggagacgcagcgccgcttggcc
gacctgcgccagcgcgtggagaccttcgctcgtgccttccccatgcctggcttcagcgac
cactga
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