Rissa tridactyla (black-legged kittiwake): 128901536
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Entry
128901536 CDS
T09443
Name
(RefSeq) LOW QUALITY PROTEIN: rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128901536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128901536
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
128901536
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Motif
Other DBs
NCBI-GeneID:
128901536
NCBI-ProteinID:
XP_054039584
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Position
26:complement(1314317..1325108)
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AA seq
411 aa
AA seq
DB search
MIPSIPSASSGGFQPRGGARGGGAGGRGRGGPPRGGSARGGRGGRGGFRGGKKVTVEPHR
HEGVFICRGKEDALVTRNLVPGESVYGEKRISVEDGDTKVEYRAWNPFRSKLAAAILGGI
DQIHIRPGSKVLYLGAASGTTVSHVSDIVGPGGWSNAVEFSHRSGRDLINVAKKRTNVIP
VIEDARHPHKYRMLIGMVDVIFADVAQPDQTRIVALXAHNFLRNGGHFVISIKANCIDST
APPEAVFAGEVRKMAGEQMKPQEQLTLEPYERDHAVVVGVYRWDWEHWEGTGMDWEGTRG
DWDGLAIFIHPQVLAAIEEPHFGLEPTGDVFLSTLLLQRQVLVTTKEPRFGVDPTGTPSR
CLPTHSPPNPVPPTPRGHPVTRVSWSRAEGAGAVAGLEEKAEEAVSSSGPR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgattcccagtattcccagtgcctccagtgggggtttccagccccggggcggggcccgg
gggggcggggccggggggcgaggccgagggggccccccccggggaggctccgcccggggg
ggccgggggggccgcggcggcttcagggggggcaagaaggtgacggtggagccgcatcgg
cacgaaggcgtgttcatctgccgggggaaggaggacgcgctcgtcacccgcaacctggtg
ccgggggagtcggtctacggggagaagaggatctcggtagaggacggtgacaccaaggtg
gagtatcgcgcttggaacccctttcgctccaagttggcagccgccattttgggtggcatc
gaccagatccacatccggccggggtcaaaggtcctttacttgggcgccgcctcggggaca
acggtttcacacgtctccgacatcgtgggacccgggggctggtctaacgccgtggagttc
tcccaccgctcaggccgggacctcatcaacgtggccaagaaacgcaccaacgtcatcccc
gtcatcgaggacgcgcgtcacccccacaagtaccggatgctcatcggcatggtggacgtc
atcttcgccgacgtggcacaaccggaccagacccggatcgtggccctcnacgcccacaac
ttcttgcgcaacggcggccacttcgtcatctccatcaaggcgaactgcatcgactcgacg
gccccccccgaggcggtgttcgcgggggaggtgcggaagatggcgggggagcagatgaag
ccccaggagcagctgacgctggagccctacgagagggaccacgccgtggtggtgggcgtc
tacaggtgggactgggagcactgggaagggactgggatggactgggaggggactaggggg
gactgggatggactggccatcttcatccacccccaggttctggcggccatcgaggagcca
cattttggccttgaacctactggagatgttttcctctcgacccttctcctccagcgtcag
gtcctggtgaccaccaaggagccacgttttggggttgaccccaccggaaccccatcccgg
tgccttcccacccattctcctcccaaccctgtcccccccaccccacggggccaccccgtg
acacgagtttcctggagccgggcggaaggtgccggagccgtggccggattagaggagaag
gcggaggaagctgtttcctcctccggccccagataa
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