Rissa tridactyla (black-legged kittiwake): 128901606
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Entry
128901606 CDS
T09443
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-X-like
KO
K06252
tenascin
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
rtd04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128901606
04518 Integrin signaling
128901606
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128901606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtd00536
]
128901606
Glycosaminoglycan binding proteins [BR:
rtd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128901606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
128901606
NCBI-ProteinID:
XP_054039652
LinkDB
All DBs
Position
27:1159955..1209779
Genome browser
AA seq
2778 aa
AA seq
DB search
MFFTCGPNEAMVVSACPWHVPCPQDEPAAMTTHELPGSAVTFEVTGLAPGHTFELFIQAQ
REKHLGAPGTLRVRTLLAQTLPTHGGSPGSPQGSLGSPASPVAPASPSFQGSPASPRSPG
SPDSLGSPASPRFPASPVSRGSPVSPESPAAPASPESLGSPVSPEAPASPVSPRSPASPR
SPASPQSPVSPPSPWSPVSPASPLSPVLPGGPSLHDLGAKLSSYNGSLLQRLESHLRATN
FPLRGNQTVPAVARAILSYLLRRSPAPLRQQLLRQIPHPKPQLMPGAAGEALVDLDGLRG
HAETVVIRYRLLEEPEGAEGELQVPGDTAVARVPGLVPGAMYRVEVHGVVRGHVSKSYTF
LVTAGAGGTDERPVDWEHVYEMELTEPQGAVAKAAPPLEEPSPRPRLGGLMVTDVTPGSV
QLEWNVLEGTFDSFTVQYRDAQGQPQALAVDGGSRTVTVPGLSPSRRYKFNLYGVWGRKR
IGLISIDAVTAAAEPEEEPPSQPILGELTASQVSPESVELEWSVREGTFDSFMVQYKDGQ
GQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAPSPPKEEPPSQ
PILGELTASRVTPESVELEWSVPEGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSP
SRRYKFNLYGVWGRKRVGPISTEAVTAAAEPEEEPPSQPILGELTASQVSPESVELEWSV
PEGTFDSFMVQYKDGQGQPQVLPVEGGSRRLTVPGLSPSRRYKFNLYGVWGRKRVGPIST
DAVTAAAEPEEEPPSQPILGELTASQVSPESVELEWSVPEGTFDSFMVQYKDGQGQPQVL
PVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAAAEPEEEPPSQPILGEL
TASQVTPESVELEWSVPEGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKF
NLYGVWGRKRVGPISTDAVTAAAEPEEEPPSQPILGELTASQVTPESVELEWSVPEGTFD
SFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAA
AEPEEEPPSQPILGELTASQVTPESVELEWSVPEGTFDSFMVQYKDGQGQPQVLPVEGGS
RRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAPSQAEEEPPSQPILGELTASQVS
PESVELEWSVREGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVW
GRKRVGPISTDAVTAAAKPEEEPPSQPILGELTASQVTPESVELEWSVPEGTFDSFTVQY
KDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAAAEPEEE
PPSQPILGELTASRVTPESVELEWSVPEGTFDSFTVQYRDGQGQPQVLPVEGGSRRVTVP
GLSPSRRYKFNLYGVWGRKRVGPISTDAVTAAAEPEEEPPSQPILGELTASQVTPESVEL
EWSVPEGTFDSFTVQYRDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVG
PISTDAVTAPSQAEEEPPSQPVLGELTASQVSPESVELEWSVHEGTFDSFTVQYKDGQGQ
PQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTEAVTAAAEPEEEPPSQPI
LGELTASQVTPESVELEWSVPEGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSR
RYKFNLYGVWGRKRVGPISTEAVTAAAEPEEEPPSQPILGELTASQVTPESVELEWSIPE
GTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDA
VTAAAEPEEEPPSQPILGELTASQVTPESVELEWSVPEGTFDSFTVQYKDGQGQPQVLPV
EGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAAAEPEEEPPSQPILGELTA
SQVSPESVELEWSVREGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNL
YGVWGRKRVGPISTDAVTAAAEPEEEPPSQPILGELTASQVTPESVELEWSVPEGTFDSF
MVQYRDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTAVAK
PEEEPPSQPILGELTASQVTPESVELEWSVPEGTFDSFTVQYKDGQGQPQVLPVEGGSRR
VTVPGLSPSRRYKFNLYGVWGRKRVGPISTEAVTAAAEPEEEPPSQPILGELTASQVTPE
SVELEWSVPEGTFDSFTVQYKDGQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGR
KRVGPISTDAVTAPAPQKEKPLSQPRLGELTAPHVTPESVELEWSVPEGTFDSFTVQYKD
GQGQPQVLPVEGGSRRVTVPGLSPSRRYKFNLYGVWGRKRVGPISTDAVTGAPGTLWVGT
VWPRSARLHWAPPRAPPDGYDLVYGPPGGPRQTVRLPPEATSHQLWGLEPSGRYGVQLWG
RGGDTPPTPLEATIDTREPDPWVPGWGGVLGFGWGAPGPLAPLPHPHPRDCAEEQLNGPG
PSRETVVFLGGDPGRPLSVFCDMETDGGGWLVFQRRQDGGTDFWRGWGDYARGFGNVTGE
FWLGNEALHALTAGTPTELRVDLRTPWDAAFARYRDFAVAGPEDHYRLHLGTYSGTAGDA
LSYHAGSPFSTRDRDPRGRPRPCAVAYAGAWWYHNCHYANLNGRYGTPRHHQGINWFPWK
GFEFSIPFTEMKLRPQRD
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcacctgcggccccaacgaggccatggtggtgtcggcgtgtccttggcatgtt
ccttgtccccaggacgagccagcggccatgaccacccatgagctgcctggctctgctgtc
accttcgaggtgacagggctggcacctggacacaccttcgagctcttcatccaggcccag
cgggagaagcacctcggggcgcctggcaccctgcgcgtccgcaccctgcttgcccagact
ctgcccacccacgggggttctccagggtcccctcagggttccctggggtccccggcatca
ccagtggccccagcgtcaccatcattccaagggtctccggcatccccaaggtccccgggg
tcaccagattccctgggatcaccagcatcaccacggtttccagcgtccccagtatctcgg
gggtccccagtgtcaccagagtccccagcagcaccagcatccccagaatccctggggtca
ccagtgtccccagaggcaccagcatccccagtgtccccaagatcacctgcatctccacgg
tccccagcatcaccacagtctcctgtgtcacctccatctccgtggtccccggtgtcccca
gcatccccactgtccccagtgctcccaggtggcccatccctgcatgacctgggggccaag
ctctcctcctacaatggctccttgctgcagcgcctggagagccacctccgggctacaaac
ttccccctccggggcaaccaaacggtgccagcggtggcccgtgccatcctctcctacctt
ctgcgccgcagcccggccccgttgcgtcagcagctcctccgccagatcccccatcccaag
ccccagttgatgccaggggctgccggtgaggctctggtggacctggatgggctgcggggc
catgcagagactgtggtgatccgttaccggctcctggaagagccggagggggccgagggg
gaactacaggtgccaggggacacagcggtggcccgggtgccagggctggtgccgggggcc
atgtaccgggtggaggtgcacggcgtggtacgggggcacgtctccaagtcctacacattc
ctggtgacggcaggggcaggtggcaccgatgaacgcccggtggactgggagcacgtgtat
gagatggagttgaccgagccccagggtgccgtagccaaagcagccccgccgttggaggaa
ccatcaccccgaccccgcctgggtgggctcatggtcactgatgtcacccctggctccgtc
cagctggagtggaatgtccttgagggaacctttgactccttcacggtgcagtacagggat
gcccaaggccaacctcaggcacttgcagttgatggcgggtcccgcacggtgaccgtgcct
ggactgtcaccatcccggcgctacaagttcaacctgtacggggtgtggggtcggaagcgg
attggtcttatctccatcgatgctgtcacagctgcggccgagccagaggaggaaccacca
tcgcagcccatcctgggcgagctgacggcctcccaggtgtcccccgagtcggtggagctg
gagtggagcgtccgcgagggcacctttgactccttcatggtgcagtacaaggatggccaa
gggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcctgggctg
tcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcggaaacgtgtgggc
cccatctccaccgacgccgtcacagccccgtccccgccaaaggaggaaccaccatcgcag
cccatcctgggcgagctgacggcctcccgggtgacccccgagtctgtggagctggagtgg
agcgtccccgagggcacctttgactccttcacggtgcagtacaaggatggccaagggcag
ccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcctgggctgtcaccg
tcccggcgctacaagttcaacctgtacggggtgtggggtcggaaacgtgtgggccccatc
tccaccgaggccgtcacagctgcggccgagccagaggaggaaccaccatcgcagcccatc
ctgggcgagctgacggcctcccaggtgtcccccgagtcggtggagctggagtggagcgtc
cccgagggcacctttgactccttcatggtgcagtacaaggatggccaagggcagccccag
gtgctgcccgtggagggtggttcgcgcaggttgaccgtgcctgggctgtcaccgtcccgg
cgctacaagttcaacctgtacggggtgtggggtcggaaacgtgtgggccccatctccacc
gacgccgtcacagctgcggccgagccagaggaggaaccaccatcgcagcccatcctgggc
gagctgacggcctcccaggtgtcccccgagtcggtggagctggagtggagcgtccctgag
ggcacctttgactccttcatggtgcagtacaaggatggccaagggcagccccaggtgctg
cccgtggagggtggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctac
aagttcaacctgtatggggtgtggggtcggaaacgtgtgggccccatctccaccgacgcc
gtcacagctgcggccgagccagaggaggaaccaccatcgcagccaatcctgggcgagctg
acggcctcccaggtgacccccgagtccgtggagctggagtggagcgtccctgagggcacc
tttgactccttcacggtgcagtacaaggatggccaagggcagccccaggtgctgcccgtg
gagggtggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttc
aacctgtacggggtgtggggtcggaaacgtgtgggccccatctccaccgacgctgtcaca
gctgcggccgagccagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcc
tcccaggtgacccccgagtctgtggagctggagtggagcgtccccgagggcacctttgac
tccttcacggtgcagtacaaggatggccaagggcagccccaggtgctgcccgtggagggt
ggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctg
tacggggtgtggggtcggaaacgtgtgggccccatctccaccgacgctgtcacagctgcg
gccgagccagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcctcccag
gtgacccccgagtccgtggagctggagtggagcgtccccgagggcacctttgactccttc
atggtgcagtacaaggatggccaagggcagccccaggtgctgcccgtggagggtggttcg
cgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggg
gtgtggggtcggaaacgtgtgggccccatctccaccgacgctgtcacagccccatcccag
gcagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcctcccaggtgtcc
cccgagtccgtggagctggagtggagcgtccgcgagggcacctttgactccttcacggtg
cagtacaaggatggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagg
gtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtgg
ggccggaaacgtgtgggccccatctccaccgacgccgtcacagctgcggccaagccagag
gaggaaccaccatcgcagccgatcctgggcgagctgacggcctcccaggtgacccccgag
tctgtagagctggagtggagcgtccccgagggcacctttgactccttcacggtgcagtac
aaggatggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgacc
gtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcgg
aaacgtgtgggccccatctccaccgacgccgtcacagctgcggccgagccagaggaggaa
ccaccatcgcagccgatcctgggcgagctgacggcctcccgggtgaccccggagtccgtg
gagctggagtggagcgtccccgagggcacctttgactccttcacggtgcagtacagggat
ggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcct
gggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcggaaacgt
gtgggccccatctccaccgacgccgtcacagctgcggccgagccagaggaggaaccacca
tcgcagccgatcctgggcgagctgacggcctcccaggtgacccccgagtccgtggagctg
gagtggagcgtccccgagggcacctttgactccttcacggtgcagtacagggatggccaa
gggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcctgggctg
tcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcggaaacgtgtgggc
cccatctccaccgacgctgtcacagccccgtcccaggcagaggaggaaccaccatcgcag
ccggtcctgggcgagctgacggcctcccaggtgtcccccgagtccgtggagctggagtgg
agcgtccatgagggcacctttgactccttcacggtgcagtacaaggatggccaagggcag
ccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcctgggctgtcaccg
tcccggcgctacaagttcaacctgtacggggtgtggggccggaaacgtgtgggccccatc
tccaccgaggccgtcacagctgcggccgagccagaggaggaaccaccatcgcagcccatc
ctgggcgagctgacggcctcccaggtgacccccgagtcggtggagctggagtggagcgtc
cccgagggcacctttgactccttcacggtgcagtacaaggatggccaaggacagccccag
gtgctgcccgtggagggtggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccgg
cgctacaagttcaacctgtacggggtgtggggtcggaaacgtgtgggccccatctccacc
gaggccgtcacagctgcggccgagccagaggaggaaccaccatcgcagccgatcctgggt
gagctgacggcctcccaggtgacccccgagtcggtggagctggagtggagcatccccgag
ggcacctttgactccttcacggtgcagtacaaggatggccaagggcagccccaggtgctg
cccgtggagggtggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctac
aagttcaacctgtacggggtgtggggtcggaaacgtgtgggccccatctccaccgacgcc
gtcacagctgcggccgagccagaggaggaaccaccatcgcagccgatcctgggcgagctg
acggcctcccaggtgacccccgagtccgtggagctggagtggagcgtccccgagggcacc
tttgactccttcacggtgcagtacaaggatggccaagggcagccccaggtgctgcctgtg
gagggtggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttc
aacctgtacggggtgtggggtcggaaacgtgtgggccccatctccaccgacgccgtcaca
gctgcggccgagccagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcc
tcccaggtgtcccccgagtctgtagagctggagtggagcgtccgcgagggcacctttgac
tccttcacggtgcagtacaaggatggccaagggcagccccaggtgctgcccgtggagggt
ggttcgcgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctg
tacggggtgtggggtcggaaacgtgtgggccccatctccactgacgctgtcacagctgcg
gccgagccagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcctcccag
gtgacccccgagtcggtggagctggagtggagcgtccccgagggcacctttgactccttc
atggtgcagtacagggatggccaagggcagccccaggtgctgcccgtggagggtggttcg
cgcagggtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggg
gtgtggggtcggaaacgtgtgggccccatctccaccgacgccgtcacagctgtggccaag
ccagaggaggaaccaccatcgcagccgatcctgggcgagctgacggcctcccaggtgacc
cccgagtccgtggagctggagtggagcgtccccgagggcacctttgactccttcacggtg
cagtacaaggatggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagg
gtgaccgtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtgg
ggtcggaaacgtgtgggccccatctccaccgaggccgtcacagctgcggccgagccagag
gaggaaccaccatcgcagcccatcctgggcgagctgacggcctcccaggtgacccccgag
tccgtggagctggagtggagcgtccccgagggcacctttgactccttcacggtgcagtac
aaggatggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgacc
gtgcctgggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcgg
aaacgtgtgggccccatctccaccgacgccgtcacagccccagctccacaaaaggagaag
ccgctgtcccagccccgcctgggcgagctgacggcccctcatgtcacccccgagtccgtg
gagctggagtggagcgtccccgagggcacctttgactccttcacggtgcagtacaaggat
ggccaagggcagccccaggtgctgcccgtggagggtggttcgcgcagggtgaccgtgcct
gggctgtcaccgtcccggcgctacaagttcaacctgtacggggtgtggggtcggaaacgt
gtgggccccatctccaccgacgccgtcacaggagccccggggaccctctgggtggggacc
gtgtggccccgcagcgcccggctgcactgggcacccccccgcgccccccctgacggctac
gacctcgtctacggcccccccggaggaccccggcagacagtgcggctgccccccgaggcc
acgtcccatcagctgtggggcctggagccatcggggcgctacggggtgcagctgtggggc
cgggggggggataccccccccacccccctggaggccaccattgacacccgtgagccggac
ccctgggtccctggttgggggggggtgttgggttttgggtggggggcacccggacccctg
gcccccctcccccacccccacccccgggactgcgccgaggagcagctgaacgggccgggg
ccttcgcgggagaccgtcgtcttcctcgggggggaccccgggagacccctgagcgtcttc
tgcgacatggagaccgacggcgggggctggctggtgttccagcgccggcaggacgggggc
accgatttctggcgggggtggggggattacgcccgcggcttcggcaacgtcaccggggag
ttctggctggggaacgaggcgctgcacgccctgacggccgggacccccacggagctgcgg
gtggatctccgcaccccctgggacgccgccttcgcccgctaccgcgacttcgccgtcgcc
ggccccgaggaccactaccgcctccacctcggcacctacagcggcaccgccggggacgcg
ctctcctaccacgccggcagccccttctccacgcgggaccgcgacccccgcggccgcccc
cgaccctgcgccgtggcctacgccggggcctggtggtaccacaactgccactacgccaac
ctcaacgggcgctacggcaccccccgccaccaccagggcatcaactggtttccctggaaa
ggcttcgagttctccatccccttcaccgagatgaagctgcggccgcagcgcgactga
DBGET
integrated database retrieval system
