Rissa tridactyla (black-legged kittiwake): 128901625
Help
Entry
128901625 CDS
T09443
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128901625 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128901625 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128901625 (SUPT5H)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
128901625 (SUPT5H)
RNA polymerase I system
128901625 (SUPT5H)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
128901625 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
Spt5-NGN
KOWx_SPT5
Spt5_N
KOW1_SPT5
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
128901625
NCBI-ProteinID:
XP_054039673
LinkDB
All DBs
Position
27:complement(1450808..1461638)
Genome browser
AA seq
947 aa
AA seq
DB search
MSDSDDSNFSEDESERSSEAEEAEENEAEEEHASAAGSEKEEAEEEEEEEEEEYDEEEEE
EDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVK
DATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTP
MYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPT
PSPQGYGGTPNPQTPGYPDPSSPQVNQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPS
PSPQSYHQVAPSPVGYQNTHSPASYHPTPSPWPTRPAPVPARWVTAR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgacgacagcaacttctcggaggacgagagtgagagaagcagcgaggcc
gaggaagctgaggaaaacgaggccgaggaggagcacgccagtgcggccggcagcgagaag
gaggaggccgaggaggaggaggaggaagaggaggaggagtatgatgaggaagaggaggag
gaagatgatgaccgacccgccaaaaagccgcgccatggtggcttcatcctggatgaggcc
gatgtggatgacgagtacgaagatgaggaccagtgggaggacggggccgaggacatcctg
gagaaagaagagatcgaagcttccaacatcgataacgtggtgctggatgaggatcgctcc
ggcgctcggcggctgcagaacctctggagggaccagcgcgaggaggagctgggcgagtat
tacatgaaaaaatacgccaagtcctcggtgggagagaccgtttacggcggctccgatgag
ctctcggacgacatcacgcagcagcagctgctgcccggagtcaaggaccccaatctctgg
accgtgaagtgcaagatcggcgaggagcgtgccacggccatcgccctcatgcggaaattc
atcgcttaccagttcactgacacgcccctgcagatcaagtcggtggtggcccccgagcac
gtgaagggttacatctacgtggaggcctacaagcagacgcacgtcaagcaggccatcgag
ggggtgggcaacctgcggatgggctactggaaccagcagatggtgcccatcaaggagatg
accgacgtcctcaaggtcgtcaaggaggtcaccaacctcaagcccaaatcctgggtgcgc
ctcaagagggggatctacaaggacgacatcgcccaggtggattacgtagagcccagccag
aaccagatctccctcaagatgatcccccgcatcgatttcgaccggatcaaagcccgcatg
agcctgaaagactggttcgccaagaggaagaagttcaagcgacccccacagcggcttttc
gatgccgagaagatccggtccctgggaggcgacgtggcgtccgacggcgactttctcatc
ttcgaaggcaaccgctacagccgcaagggcttcctcttcaagagcttcgccatgtcggct
gtgataacggagggggtgaagcccaccctgtcggagctggagaagttcgaggaccagccc
gaaggcatcgacctggaggtggtgacggagagcacggggaaggaacgagagcacaacttc
cagcccggcgacaacgtggaggtgtgcgagggcgagctcatcaacctgcagggcaaaatc
ctcagcgtcgacggcaacaagatcaccatcatgcccaaacacgaggacttgaaggatatg
ctggagttcccggcgcaggagctgcggaagtatttcaagatgggcgaccacgtcaaggtg
atcgcggggcgttttgagggcgacacggggctgatcgtgagggtggaggaaaacttcgtc
atcctgttctccgacctcaccatgcacgagctgaaggttctgccgcgggacctgcagctc
tgctcggagacggcgtcgggggtggatgtgggggggcagcacgagtggggcgaactggtg
cagctggacccccaaaccgtgggcgtcatcgtccgcctggagcgagagaccttccaggtg
ctgaacatgtacgggaaggtggtgacggtgcggcaccaggctgtcaccaggaagaaggac
aatcgcttcgccgtcgccctcgactcagagcagaacaacatccacgtcaaggacatcgtc
aaagtcatcgacgggccccactccggccgcgagggggagatccggcaccttttccggggc
ttcgccttcctgcactgcaagaagctggtggagaacggcggcatgttcgtctgcaagacc
cggcacctcgtcctggcgggcggctccaagccgcgggacgtcaccaacttcaccgtgggt
ggcttcgcccccatgagcccccgtatcagcagcccgatgcaccccagcggggctggccaa
cggggcggtttcggcgggggtggcatgagccgcggccgcgggcgccgggataacgacctc
atcgggcagacggtgcgcatctcccagggaccctacaaaggctacatcggggtggtgaag
gatgcgacggagtcgacggcgcgcgtggagctgcactccacctgtcagaccatctcggtg
gaccgccagcgcctcaccaccgtgggctcccgacgcccgggcgggatgacatcagcctat
gggcgcacccccatgtatggctcccagacccccatgtacggctccggctcccgcaccccc
atgtacggttcccagacccccctgcacgacggaagccgcacgccgcactacggctcacag
acgccgctgcacgacggcagccgcaccccggcccagagcggtgcctgggaccccaacaac
cccaacaccccctccagggccgacgaggacttcgagtacggcttcgacgacgagcccacg
ccgtccccccagggctacgggggcacccccaacccccagacccccggctaccccgacccc
tcctccccccaggtcaaccagccctacaacccccagacccccggcaccccggccatgtac
aacacggatcagttctcgccctacgccgtgccctcgccccagggctcctaccagcccagc
cccagcccccagagctaccaccaagtggcccccagccccgtgggctaccagaacacccac
tcgccggccagctaccaccccacaccctcgccatggcctaccaggccagccccagtccca
gcccggtgggttacagcccgatga
DBGET
integrated database retrieval system
