Rissa tridactyla (black-legged kittiwake): 128901711
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Entry
128901711 CDS
T09443
Symbol
SAMD4B
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128901711 (SAMD4B)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128901711 (SAMD4B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SMG1
SAM_3
Motif
Other DBs
NCBI-GeneID:
128901711
NCBI-ProteinID:
XP_054039845
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All DBs
Position
27:complement(1467330..1475611)
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AA seq
659 aa
AA seq
DB search
MMFRDQVGIVAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEA
EANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVE
ESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGGGAPPARPPRPDAPRRPPPPHEWP
EHPATELGPPWPEATPRENGNPPFHPPASGNGLGGAALPCQLHPSPLKRSLSLVPGSPQG
GGSEWPGGTPGDEAAVPVPPRPPFGDHAPLSPQSSVASSGSEQTEEPAGGRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLESQNVTKGARHKIALSIQKLRERQ
SVLRALEKDILEGGNLWTALQELQQIMVTPIKAFRPPPSAPPSNGTPDGAPPGAADAFVP
PTPAADAEAPAAPVPDGDIPGQFTRVMGKVCTQLLVSRPDEENITSYLQLLEKCLSHEAF
TETQKKRLLSWKQQVLKLLRAFPKKVPLDGPGYRPPKGWAFGSNSLPMSALWGGAGGRRG
QRPFALPPRALPPARLGLLGPAGGAPALGPPSADPPSVRRGRQSLWFGSGGAGGAPGSRS
AVQRTHSLPXHTSPQALLAFPQECPLPGTDLEINPTLESLCLSMTEHALGDGADKTSTI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaggtggggatcgtggcggggtggttcaagggctggaacgagtgc
gagcagacggtggccctgctctcgctgctgaagcgcgtcacccgcacccaggcccgcttc
ctccagctctgcctcgagcactcgctggccgactgtgccgacatccacctcctcgaggct
gaggccaacagtgccgcggccatcagccagtggccacaggagccggcggaggcggcggtg
gccctgctgctggcccacctgccgctgctgcagccgggcaacgcggcggccaaggccgag
tacatgaagcggctgcagaaggtgctggcttacgccatcgagagcaaccgctgcgtggag
gagagccggcagctcctctcctacgccctcatccaccctgccaccaccctggacgaccgc
agcgccctggccctctggttgggccacttagaggagcgtttggccggcggcggggctccc
cctgcccgccccccccgccccgacgcccctcggcgcccgcctcccccccacgagtggccc
gagcacccggccactgagctggggccgccctggcccgaggcgaccccccgggagaacggc
aacccacccttccacccccctgccagcggcaatggcctggggggagcggctctgccctgc
cagctgcaccccagcccgctgaagcgctccctctcgctggtgcctggcagcccccaggga
gggggcagcgagtggccgggggggacgccgggggacgaggccgctgtccccgtgcccccc
cgcccccccttcggggaccacgcacccctctcgccccagagcagcgtggcctcctcgggc
agtgagcagacggaggagccggccggcggccgcaacaccttccaggaggacggcagcggc
atgaaagatgtcccctcctggctgaagagcctgcggctgcacaagtacgcggcgctcttc
tcccaaatgacctacgaggagatgatgacgctgacggagcatcacctcgagtcacagaac
gtcaccaagggtgcgcggcacaagatcgccctcagcatccagaagctgcgggagcggcag
agcgtcctcagggcgctggagaaggacatcctggaggggggcaacctgtggacggcgctg
caggagctccagcagatcatggtgacccccatcaaggccttccggcccccccccagcgcc
cccccctcaaacggcacccccgacggggcccccccaggggccgccgatgccttcgtcccc
cccaccccggccgccgacgccgaagcccccgccgcccccgtccccgacggggacatcccg
gggcagttcacccgcgtcatgggcaaagtgtgcacccagctgctggtgtcgcggccggac
gaggagaacatcaccagttacctccagctcctcgagaagtgcctgagccatgaggcgttc
acggagacgcagaagaagaggctcctctcctggaagcagcaggtcctgaagctgctccgc
gccttccccaagaaggtgccgctcgacggcccgggctatcggccccccaaaggctgggcc
ttcggctccaactcgctccccatgagcgctctgtgggggggggcgggggggcggcggggg
cagcgccccttcgcgttgcccccccgcgcgctgccccccgcccgcctggggctgctgggg
ccggcagggggggcccccgccctcggccccccctcggcggaccccccctcggtgcgcagg
ggacgccagagcctgtggtttggcagcgggggggccgggggggccccggggagccgcagc
gcggtgcagcgcacccactcgctgcccngtcacacctcgccccaggccctgctcgccttc
ccccaggagtgtcccctccccggcactgacctggagatcaaccccacgctggagtcgctg
tgcctgagcatgacggagcacgcgctgggcgacggcgcagacaaaacctccaccatctga
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