Rissa tridactyla (black-legged kittiwake): 128901802
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Entry
128901802 CDS
T09443
Symbol
FAU
Name
(RefSeq) FAU ubiquitin-like and ribosomal protein S30 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128901802 (FAU)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128901802 (FAU)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
Ribosomal_S30
TPR_14
HAT_Syf1_CNRKL1_N
ubiquitin
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_11
TPR_2
TPR_16
PDZ_6
TUG-UBL1
TPR_10
Motif
Other DBs
NCBI-GeneID:
128901802
NCBI-ProteinID:
XP_054039925
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Position
29:complement(114009..127096)
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AA seq
825 aa
AA seq
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MAAEGPEAPASPGRGGTEGALGDGGDGGTGPPGEAGAPVAELPPPAPSPAEEEPSDAAVP
PPVPQSCNGAAIAPPEPEEPPPAAPEEPPPPRDPEPPAEEPPLTYPLDFEKFWLAARNNP
HDFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVF
ERGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGVFEAAVAAAGMDFRSDKLWELY
VEWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKL
ATDPVPKPPEPEATEAPPGEDLPPGVEGKAAAAAADAQEDLDQEKIRELVISMRQQIYAQ
NEAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIAC
ALYEEFWIKYTKYLENHTVAGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRI
LRCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMRANEGLPLASFYAVKLARQAC
KVQKNLGKARKVLVEALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERALRSPLPD
EAKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAARKRAPENGSDEPDDKRLRPD
EASGLLGPLNFSGTGGDMGSNPSAYNYWYQVTMQLFIRAQSLHTIEVSGAETIAQIKAQV
AALAGVPPEDQVLSFGGTPLDDDTVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRG
QTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggggccggaggctccggccagcccgggccgcggcgggaccgagggggcg
ctgggggacggcggggacggcggcaccggtccccccggtgaggcgggagcccccgtggca
gagctgccgcccccagcccccagccccgccgaggaggagcccagcgacgctgccgtcccc
cccccagtcccacagagctgcaatggcgccgccatcgccccccctgagcccgaggagccc
cccccggccgctcccgaagagcccccgcccccccgggaccccgagccccccgcggaggag
ccccccctcacttaccccctcgatttcgagaagttttggctggcagcgcgcaacaacccc
cacgacttcactgcgtggaccgagctcctgcagtacgtcgagcaagagaaccatctcttc
gccgcccgcaaagccttcgatgcctttttcgcacactacccctactgttacggctactgg
aaaaaatacgcagacatggagcgtcgcttcgactgcagccgggagaccgaggaggtgttt
gagcgggggctgcagtccatccccctcagcatggacctgtggatccactacatctcctac
ctccagtccaccctggacatgaatcttcccgaatccatccaaaaaatccgcggcgtcttc
gaggcggcggtggcggcggccggcatggatttccgctcggataagctgtgggagctctac
gtggagtgggaacgggaacagggagacctgcgagccgtcaccggtatctacgaccgcgtc
ctctccatgcccacgcagctctacaaccatcactgggagaagttcaaggagcacgtcctc
cacaatcccccgaaagacatcttgtccccggaggagcttctctgggtccaatccaaactg
gccaccgatcccgtgcccaaaccgccggagccggaggcaacagaagcgccgccgggagag
gatcttccccccggcgtggaggggaaggcggcggcggccgcagccgatgcccaggaggat
ttagaccaggagaaaatccgggagctggtgatctccatgcggcagcagatctacgctcaa
aacgaggcggaagtcagcaaacgctggaattttgaggacgggatcaagcgtccctatttc
cacgtgaagccgctggagagggctcagctgcggaactggcgggattacctggattacgaa
atggcggccggttcgcacgagcgcaccatcgtcctcttcgagcgctgcgtcatcgcctgc
gccctctacgaggagttctggatcaagtacaccaaatacttggagaaccacacggtggcg
ggggccaggagcgttttccagcgcgcctgcgggtaccacctgcccaggaaacccaacatc
cacctcctctgggcggctttcgaggagaaacaagggaacctggacgaagcccggcgtatc
ctgcgctgcttcgaggaggtggtgccgggtctggccatggtccggctgcgccgcgtcagc
ctggaacgtcggcagggaaacctggaggaggcggaggcgctgctgctggaggccatgcgc
gccaacgaggggctgcccctcgcctccttctacgccgtcaaactggctcggcaggcctgc
aaggtgcagaagaacctgggcaaagcccgcaaggtgctggtggaggccctggaaaaggac
ccggacaacgcccggctccacgccaacctcctggagatggaattcggggccgacgtccgt
caaaacgaaggcaacaccatgagctgcttcgagcgggcgctgcgcagccccctccccgac
gaagccaagctcatcttctcccagcgccgcgtcgagttcctcgaggatttcggctccagc
atacacagcctgctgacggcttacgacgagcaccagaagatcctcaaacagcacgcggcg
cgcaagagggcccccgagaacggctcagacgaacccgatgacaaacgcctccgccccgac
gaagcctccggccttttgggtcccctcaatttctccggcacggggggggacatggggtcc
aacccctccgcctacaactactggtaccaggtcaccatgcagctcttcatccgtgcccag
tccctccacaccattgaggtctccggcgccgagaccatcgcccaaatcaaggcgcaggtg
gcggcgctggcaggcgtccccccggaggaccaagtgctgagctttggtgggacccccctg
gacgatgacaccgtgctgggacagagccccctccccgaatttgccaccctggagctctcc
acccgcctcctgggggggaaagtccacggttccctcgcccgcgctggcaaagtgaggggc
cagacccccaaggtggccaagcaggagaagaagaagaagaagacggggcgagccaagcgg
cgcatgcagtacaaccgccgcttcgtcaacgtcgtccccaccttcggcaagaagaagggc
cccaacgccaactcctga
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