Rissa tridactyla (black-legged kittiwake): 128901803
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Entry
128901803 CDS
T09443
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04120
Ubiquitin mediated proteolysis
rtd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128901803 (SYVN1)
04120 Ubiquitin mediated proteolysis
128901803 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128901803 (SYVN1)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128901803 (SYVN1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128901803 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128901803
NCBI-ProteinID:
XP_054039930
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Position
29:complement(127456..137033)
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AA seq
606 aa
AA seq
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MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQTPPEPPEQAPQPPQTPQVP
QPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGTENTAPSSSAASASRPSDAANA
GSEAAAAGTVPAFPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLE
ARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSAPAEEPTTLRSPGSPSAP
ATAGTAAGSTAATDPTAPVGAEGFTAEEEEEEDDGGEGSSSLDEPDTAELRRRRLQKLAS
PPPASH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcacggcggtggtgatggcagggagcctggcgctgacgacggcagtggtggct
cacgcctattacctgaagcaccagttctatcccaccgtggtttatcttaccaaatccagc
cccagcatggctgttctctacatccaggcttttgtgttggtttttctcctgggtaaattt
atgggcaaggtgtttttcgggcagctgcgggcagcggagatggagcacctactggagcgg
tcgtggtacgccgtgacggagacctgcctggcctttaccgtcttcagggacgacttcagc
cctcgcttcgttgcccttttcaccctcctcctcttcctcaagtgcttccactggttggct
gaagaccgggtggactttatggaaaggagccccaacatctcctggcttttccacttccgt
atcgtctccctgatgttcctcctgggaatcctggatttcctcttcgttaaccacgcgtac
cacagcattctcacgcgaggagcctcagtccagctcgtcttcggctttgagtacgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgttctgcactccatcgacctgcag
aatgagaacccttgggacagcaaagccgtctacatgctgtacacggagctcttcacgggc
ttcatcaaagtcctcctctacatggccttcatgaccatcatgatcaaagtccacaccttc
ccactcttcgccatccgccccatgtacctggcgatgaggcagtttaagaaagcggtgacg
gatgccatcatgtctcgccgggccatccgcaacatgaacacgctctaccctgacgccacg
ccagaagagctgcaggccatggacaacgtctgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgtctgccttgcaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacgtgtcccacctgccgcatggacgttctccgggcttccctcccggca
cagacgccgcccgagccgccggagcaagccccacagccgccccagaccccccaagtcccc
cagccccccaactttccccaggggatccttccccccttccccccaggaatgtttcccttc
tggccgccggttggtcccttcccgccagttcccggtgttcaaccgcccaacggcaccgaa
aacaccgcgccgagctccagcgccgcttcagcttccaggcccagtgacgctgccaacgcc
ggatcggaagctgccgctgcggggacggtgccggcgtttcctttccccccgccgtggatg
ggaatgccgtggccgcccctctttggcttccccccgatgccggtgccgccggctggcttt
gccggtttgacagaggaagaacttcgagccatggaaggccacgatcggcaaaacctggaa
gcgcggttacagtgtctccagaacatccacaccctcctggacgctgccatggtgcagatc
aaccaatacctgacggtcctggccaccatcgggtctccccgacccgccgctccccggccc
ccctctgcccctgctgaggagcccaccaccctgcgctcacccggcagcccctcggcaccg
gcgactgctggcaccgccgccggctccaccgcggctaccgatcccactgcgccggtgggc
gccgaaggcttcaccgccgaggaggaagaggaggaagacgatggcggcgaaggctcgtcc
tcgctggatgaacctgacacggcggagcttcgccgccgcaggctacagaaactggcgtcg
ccgccgccagcctcgcactga
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