Rissa tridactyla (black-legged kittiwake): 128901825
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Entry
128901825 CDS
T09443
Symbol
STX5
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-5
KO
K08490
syntaxin 5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128901825 (STX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128901825 (STX5)
Membrane trafficking [BR:
rtd04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
128901825 (STX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF16
Apolipoprotein
DUF5063
DUF2207_C
HsbA
DUF6746
Vac_Fusion
UPF0242
DUF3130
Cep3
MCPsignal
Spectrin
Motif
Other DBs
NCBI-GeneID:
128901825
NCBI-ProteinID:
XP_054039963
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All DBs
Position
29:complement(303123..308342)
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AA seq
352 aa
AA seq
DB search
MNARRRHGSRQREQGVYLGPPQTQAVSPPPFAAAPXPPLAGPPPLLPPPPDATMSCRDRT
QEFLSACKSLQGRQDGGQLGRAAPGAGRQRSEFSLMAKRIGKDLSNTFAKLEKLTILAKR
KSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQEMVRARGGQSGRHVQTHSNTVVVSLQS
KLASMSNDFKSVLEVRTENLKQQRSRREHFSRAPVSALPLAASNLGGSAMLQTEPQRAGT
VAIEMDARTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQR
IDASVEDAQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIVFFIVFVVFLA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccggcgccggcacggctctaggcagcgggaacagggcgtttacctggggccc
ccccagacacaagccgtgtcccccccgcccttcgccgctgcccccnncccgcccctcgcc
gggccccccccgctgctaccgccccccccggacgccaccatgtcgtgtcgcgataggacc
caggagttcctctccgcctgcaagtccctgcagggccggcaggatggggggcagctgggc
agagcagccccgggtgccgggcggcagcgcagcgagttcagcctcatggccaagcgcatc
gggaaggatctcagcaacaccttcgccaagctggaaaagctgacgatcttggccaagcgg
aaatccctctttgacgacaaagcagtggagatcgaggagctcacttatatcatcaagcag
gacatcaacagcctgaacaagcagatcgcgcagctgcaggagatggtgcgggcccggggg
ggccagagcgggcgccacgtccagacccactccaacaccgtggtggtgtcgctgcagtcc
aaactggcctccatgtccaacgacttcaaatccgtgttggaggtgcggacagagaacctg
aagcagcagcggagccgccgtgagcatttctcccgcgcccccgtctccgctttgcccctc
gctgccagcaacttgggcggctcggccatgctgcaaaccgagccccagcgcgccgggacg
gtggccatcgagatggacgcccggacgagccaacagctccagctcatcgacgagcaggat
tcctacatccagagccgggcggacacgatgcagaacatcgaatccaccatcgtggagctg
ggctccatcttccagcagttggcccacatggtgaaggagcaggaggagaccatccagagg
attgacgccagcgtggaggacgcccagctgaacgtggaggcggcgcacggggagatcctc
aagtatttccagtccgtcacctccaaccggtggctgatggtcaagatcttcctcatcctc
atcgtcttcttcatcgtcttcgtcgtcttcctcgcctga
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