Rissa tridactyla (black-legged kittiwake): 128901900
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Entry
128901900 CDS
T09443
Name
(RefSeq) lens epithelium-derived growth factor-like
KO
K25057
PC4 and SFRS1-interacting protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128901900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128901900
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
128901900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
DUF3916
Motif
Other DBs
NCBI-GeneID:
128901900
NCBI-ProteinID:
XP_054040023
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Position
W:complement(18855369..18924085)
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AA seq
500 aa
AA seq
DB search
MECLEDECSHPAIKSAVKETICESCQEPTEGNEEKGEAKRRKSVISRSSSKQDNNVPTED
KEMDTVKEDDVPFEKFSSKDVMKTNDICIPKVVRRGRKRKAEKQAEAAEAAVVAAAVAVT
PKVSPKRGRPAATEVKVSRPRGRPKLVKPPWPSETDIVHEEEKTKKKGLEEKSKKQGKKD
EEHQKEEDKSRKEFDRREAKRETEPKRRNTSQVGSASVSDSEEDEGEHEGDKKKKGGRNF
QGAHRRNMLQGQHERELAERKCKQEEQMESEPQNKEGKKSEVKKMEKKRETSMDSRLQRI
HAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMILTLKKIRKFKVSQVIMEK
STMLYNKFKTMFLVGEGDSVLSQVLNKSLAEQKQHEETKKPKEHWKKGPTKKIEKEKELT
GVKTLNGGSEIQDINQSQQNGENTEEKKEKHEVGTKKNTKRISDSIFYTTNVWYRYQCQN
YKHQVKKVSLKVQRNLFEKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcctggaggatgagtgttcccatccagctattaaaagtgctgtcaaagaaact
atttgcgagagttgtcaagagcctactgagggcaatgaagaaaaaggagaagccaaaagg
aggaagtctgttatttccagatcatcaagtaagcaggataataatgtacctacagaagac
aaagagatggatactgtcaaagaagatgacgtcccctttgaaaaattcagtagcaaagat
gtgatgaaaacaaatgatatatgcattcctaaagttgttagaagaggaaggaagagaaag
gctgaaaaacaagctgaagctgcggaagctgcagtggtagcagctgcagtggctgtgact
ccaaaagtaagccctaaaagaggaagaccagcagctactgaagtaaaggtttcaagacca
agagggagacccaaattggtgaaaccaccttggccttcagagaccgacatcgttcatgaa
gaggagaagacaaagaaaaaaggactggaagaaaagtccaaaaaacaagggaaaaaagat
gaggagcatcagaaggaagaagacaaatcgaggaaggaatttgatagaagagaagcaaag
agggagaccgaaccaaaacggagaaatacttcccaagtgggttcagcatcagtgtctgat
tctgaagaggatgaaggagaacatgaaggtgataagaagaaaaaaggagggagaaacttt
caaggagctcatcgaagaaacatgttacaaggccaacatgagagagaactggcagaaaga
aagtgtaagcaagaggagcaaatggaatctgagccgcaaaataaagaaggtaagaaatca
gaagttaagaagatggagaagaagagagaaacatcaatggattccaggcttcaaaggata
catgcagaaattaaaaattcgctcaaaattgataatctagatgtgaacaggtgtattgag
gctcttgatgagcttgcttcccttcaggtcacaatgcaacaagctcaaaaacacacagag
atgattttgactctaaagaagatacggaagttcaaagttagccaagttatcatggaaaaa
tctacaatgctctataacaagttcaagaccatgtttctagttggagaaggagattctgtt
ctctcacaggtactaaataaatcacttgctgagcagaagcagcacgaggaaacaaaaaaa
cccaaagaacattggaagaaaggtccaaccaaaaaaatagaaaaggaaaaagaactaaca
ggtgtgaagacactaaatggagggtctgaaattcaggacatcaaccaatcacaacagaat
ggagagaacactgaggaaaagaaagagaagcatgaagttggcactaagaaaaacacaaaa
agaatatcggattccatcttctacactaccaatgtttggtaccggtaccagtgtcagaac
tacaaacatcaggtgaagaaagtgagcttgaaagtccaaaggaatctctttgaaaagaaa
tga
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