KEGG   Rissa tridactyla (black-legged kittiwake): 128901946
Entry
128901946         CDS       T09443                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtd04121]
    128901946
   03400 DNA repair and recombination proteins [BR:rtd03400]
    128901946
Ubiquitin system [BR:rtd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    128901946
DNA repair and recombination proteins [BR:rtd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128901946
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA CUE DUF1510 API5
Other DBs
NCBI-GeneID: 128901946
NCBI-ProteinID: XP_054040108
LinkDB
Position
W:complement(15056323..15187850)
AA seq 1118 aa
MMTSVGSERIRGTRDKMQISTTQPTQPQKQVVQATAEQIRLAQMIYDKNDADFEDKVKQL
MEVTGKNQDECIVALHDCNGDVNRAINILLEGSSDTTSWETVGGKKKSLGKESSENKENR
EKRGDREVSRGRGSSNRRGRGGSRGREFRAEENGVDNNQRDKPSDRGKRGRGRGCGRGRG
RGAGRFSAQGMGTFNPADYTESSATDGFGTKSEIWETGQNDADDGTGAWKNSIEEWTAED
WNEDLTETKVFTASSVPAENHVTPGQSIDLVTLLQRPVTSTQETEGNSFEAPQQQTFGQA
LVFTNSQHSTQMASGTGSSSAVNSYSPQSLSAVICSGFGELGSSKLANSTGSQILDQLKS
PGLGQFTSQQNNSGSTTTTTTTTSSWDLKLPITQSSVLSQFDFKSQPEPSPVLSQLTQRQ
QQQMQTVPVPPPPGLESFSSQVKLCEPLPVDTSTTVSKMLQLPTISMDNQAATAHQTQQK
HIKPPKRRITPASKIPASAVEMPGSADVTGLNVQFGALEFGSEPALPEFGSTSSSENTSQ
ATNNCLYSKSVNDPLNTSLPISNTVQESTYTTSTITSSSLTCSSQSTSPVMTTSSYDQTS
VHSRIAYQSSMAPSESTPVAVTNGHSGVRTQATLDTTSSVPVPKTEPSPLLPSAGSLPNV
VSTTASLLPSTSQHAATLPSLPESSDLASSSLPQLSSSLSNHQSSLSPASVLSSSTSHAH
TSVENTTSLQPSTTFSTFSTSATSTTSSVVSMASSMNTTASLGLSITSVSIPAATTRAAP
LVSSGKAPPNLPQGVPPLLHNQYIVGPGGLLPAYPQIYGYDDLQMLQSRLPMDYYGITFP
APATLTGRDGSLANNLYSGDVTKFGRGDSASPAPATTLAQPQQNQTQTHHTTQQPFLNPT
LPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVPPASAKQHGVNLNTASTPFQQASGYGQHG
YGAAGYDDLTQGTAAGDYSKGGYSGSSQAQNKSAGTGPGKGVSVTSGNTGVPDISGSVYN
KTQTFDKQGFHTGTPPPFSLPSALGSTGPLNPGAAPGYAPAPFLHILPAHQQPHSQILHH
HLQQDGQGGSGQRNQPSTMQQKSQATKTAYGTSPYWTN
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgatgacttcggtgggcagtgaacgtatccggggcactcgggacaaaatgcaaatttca
accacacagccaacacaaccacagaaacaagtagtgcaggcaacagcagaacagattcgc
cttgctcagatgatctatgataagaacgacgcagatttcgaagataaagtgaaacaactt
atggaagtgacgggaaaaaaccaggatgagtgcatagtggcactacatgattgtaatggg
gatgtgaacagagcaatcaacatactgctggaaggaagttcagacacgacatcttgggag
actgtaggaggaaagaagaaaagccttggaaaggaaagttcagaaaacaaagagaacaga
gaaaaacgaggggacagagaagtaagtcgcggacggggaagttccaaccgacggggaaga
ggaggcagccgtggccgagagtttagagctgaagagaatggagtggacaacaatcagaga
gacaagccttcagaccgtgggaaacgtggtcgtgggagagggtgtggacgtggcagaggg
agaggagcagggaggttttcagcccaaggcatggggacatttaaccctgcagactatacg
gagtcttctgccactgatggctttgggacaaaatcagagatttgggagactggtcagaat
gatgcagatgatggaactggagcgtggaaaaactcaatagaagaatggaccgcagaagac
tggaatgaagatcttactgaaacaaaagtcttcactgcttcctctgttccagctgagaat
catgtgactcctgggcaaagcattgatttggtaacactgcttcaaaggcctgtgacttct
acccaagagacagaaggcaactcatttgaggctccccagcagcagacctttggccaagcc
ctagtcttcacaaattctcagcacagcacccagatggcatcaggaactggcagctccagt
gctgtaaactcttattctcctcaaagtctgtctgcagttatttgttctggctttggagaa
cttggatcctctaaattggcaaactctactggatcccaaatcttggaccaattgaaatct
ccaggtttgggccagtttacttctcaacaaaacaatagtggctctaccaccactaccaca
actaccacatcatcctgggatctaaaactgcccattactcagtcctcagtccttagtcag
tttgactttaaatcccagcctgaaccatccccagttctgagccagctgacccagcgacag
caacaacaaatgcagacagtccctgttcctcctcctcctgggctggagtccttctcctcc
caggtaaaactctgcgagccattgccagtagacacctctacaactgttagcaaaatgtta
cagctccccactatatcaatggataaccaggcagcgactgcccatcaaacccagcaaaaa
catataaaaccaccaaaacggaggataactccagcatccaagattcctgcctctgcagtg
gagatgcctggatcggcagatgtgacagggttaaatgttcagtttggagctctggagttt
ggatcagagcctgcactcccagagtttggatcaacttcaagcagtgagaataccagccag
gcaaccaacaattgcttgtactcaaaatctgtaaatgatcctttgaatacctctttgcca
atatccaatacagtacaggagtccacctacacaacctctaccatcacctcttctagtctg
acctgctcatcccagagcactagcccagtaatgacaacttcctcctatgaccagacttct
gtgcacagtaggatagcgtaccaaagctccatggctccatctgaatcaacccctgttgca
gttacgaacgggcacagtggtgttaggacacaggcaactcttgacactacttcatcagtt
ccagtgcctaagacagagccttctcctttgctaccttctgctggttctctgcctaatgtg
gtatccaccactgcttcgcttctgccttcaacatcacagcatgcggcaacattgcccagc
ttgcctgagtccagtgatttggccagcagctcgcttccccagttaagcagctcgctttcc
aatcatcagagcagcctctcccctgcctcagtgttgtcttcaagcacatcacatgcacac
actagtgttgagaacacaacttcactccagccctcaacgaccttttcaactttttcaacc
tcagccactagcaccacctcttcggttgtcagcatggcaagcagtatgaacactacagcc
agccttggactgagcattaccagtgtgtctataccagctgctaccacacgggcagctccc
ttagtgtcttcaggcaaagctcccccaaacctgccccaaggtgtaccgcccttgttgcat
aaccagtatattgtgggacctggaggacttctgcctgcctacccacagatttatggttat
gatgatctccagatgcttcaatctaggctgccaatggattactacggaattacattccct
gctcctgcaaccttgacaggcagagatgggagccttgctaacaacctgtactcaggtgat
gtgacaaaatttggccgtggggattctgcctctcctgctcctgctaccacgcttgcccag
ccacagcagaaccagacgcagactcaccatacaactcagcagcccttcctcaacccgacc
ctgcccccagggtacagctacactgggttaccttattacgctggtgtgcctggcgtaccc
agtgcattccagtatgggccaaccatgtttgtacctccagcatctgctaaacagcatgga
gtcaacctgaacactgcgtcgactcctttccagcaagcgagtggctatgggcagcatggc
tatggagcagcaggctatgatgacttaacgcagggaacggcagctggagattacagcaaa
ggaggctacagtgggtcatctcaagcacaaaacaaatctgctggcactggacctgggaaa
ggtgtttctgtgacctcaggtaacacaggtgtgcctgatatcagtggctcagtctataac
aagactcagacatttgacaagcagggattccatactggcacgccgcctcctttcagcctg
ccctctgctcttggatcgactggacccctgaaccctggtgctgccccgggttatgctcca
gccccatttctccatatcctgcctgcgcatcagcagcctcattcccagatactgcatcac
catcttcagcaagatgggcagggtggatctggccaacgcaaccaacccagcaccatgcag
caaaagtctcaggctaccaaaactgcctatggcacttctccatactggacaaactaa

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