Rissa tridactyla (black-legged kittiwake): 128901955
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Entry
128901955 CDS
T09443
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128901955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128901955
03036 Chromosome and associated proteins [BR:
rtd03036
]
128901955
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128901955
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
128901955
Chromatin remodeling factors
BAF complex
128901955
PBAF complex
128901955
GBAF(ncBAF) complex
128901955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
128901955
NCBI-ProteinID:
XP_054040131
LinkDB
All DBs
Position
W:complement(8992649..9180401)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSTPVDPGTMPHPGPSPGPGPSPGPILGPSPGPVPSPGSIHSMMGPSPGPSSVPHPMPTM
GSTDYLQEGIYQQHKPTDGLHEKGMVEDVHCSSMKSMRPPHPGMGPPQSPVDQHNQGYMS
PHPSPLGAPEHVPSPMSGRGPTPPQMTPCQPGPMIPGDPQVMSQPNRAPCPFSPVQLHQL
RAQILAYKMFARGQSLPENLQLAVQGKRTLPGIQQQQVPAAYSRQSSIGSHAMSGPTAGP
GPAPGVPGHIAAMTPKPWTEGQAPDMSVPNTPQKLSVPPPSGRPSPAHTASQPSAAMPGP
SVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPIEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTILETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSLSGKIQKISKGVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEDNAEGMGAGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LFGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEEDEEESSRLEADQKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIIERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKVLYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTVMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARHEEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEIRLKKRKRRRNLDKDSGKEDGERAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYRDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERICNHKYR
NLSDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEESEDESEESEEEE
EESESKSVKVKIKLNKKDEKKWDKSKGKKRQRRVKAKPVVSDNDSDEDQDKNDQSEASGS
DDE
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaccagtggaccctggcacaatgcctcatcctggtccttccccagggccaggt
ccttcacctggaccaattctaggacctagcccaggaccagtgccatctcctggctcaata
cacagcatgatggggccgagtcctggaccgtccagtgtcccacatcctatgccgacaatg
gggtctactgattacctgcaggagggcatctaccaacagcataagcctactgatggcttg
catgaaaaaggaatggtcgaagatgttcattgtagctctatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccagtggaccaacataatcaaggctacatgtct
ccacacccatctccactgggagcaccagaacatgtgcccagtccaatgtctggacgaggt
ccaactccaccccagatgacaccatgtcagccaggacccatgataccaggagacccacaa
gttatgagtcagcccaacagagctccttgccctttcagtcctgtacagctacatcagctc
cgagctcagattctggcatacaaaatgtttgctagaggtcagtctttgccagaaaacctt
caacttgctgttcaaggaaagaggaccctgcctggcattcagcagcaacaggttcctgct
gcctatagtaggcaatcaagtattgggtcacatgcaatgagtggtcctacagctggccca
ggtccagctccaggagtacccggacatatagctgccatgacccctaaaccttggacagaa
ggccaagccccagatatgagtgttcctaatacaccacaaaagctctctgtaccacctcct
agtgggaggccttctcctgcccacactgcttcccagccttctgcagccatgcctgggccc
tctgtaccacagcccacacctggacagccttcacctattgtgcagctgcagcaaaaacag
aatcgtatcagccctatccagaaaccacaagggttggatccaattgaaatactccaggaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaagaactggagaacttgccc
ggctctttgcctcctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctgagacaagaggtagtagcctgcatgcgtcgtgacacaata
ctagagacagcactaaactccaaagcctacaagagaagcaagcgccagactctgagggag
gcccgtatgacagaaaagcttgagaagcagcagaagatagaacaagagaggaaacgtaga
cagaaacaccaggaatatctgaacagcatattgcaacatgctaaagattttaaagaatac
cacaggtcattgtctgggaaaatacaaaaaatttctaaaggtgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaggaaactgagagaattgagaaagaaagaatgagaaga
ctaatggctgaagatgaagaaggctaccgtaagttgattgaccaaaagaaagacagacgc
ctagcctacttattgcagcagacagatgagtatgtggctaatctgaccaatctggtatgg
gagcacaaacaggcacaagcagccaaagagaagaaaaagaggaggagaagaaagaagaag
gcagaagacaatgcagaaggaatgggagctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagttactcacactgaaacaggcaaagtt
ctttttggaccagaagcaccaaaagcaagtcagctagatgcttggttggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggag
gaggaagatgaagaagaatcaagtaggttagaagcagatcagaagatacttctggatcct
aacagtgaggaagtttctgagaaagatgctaaacaaatcattgagacagccaaacaagat
gtggatgatgaatacagtatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcatagagagggtggagaagcagtcttctcttcttattaatggtacacta
aaacattatcagctccagggcctggaatggatggtttcactctataataacaatttgaat
ggaattttagctgatgaaatgggactaggaaaaaccatacagactattgcactcatcact
tatctgatggaacacaaaagactcaatggcccctatctcatcattgttcccctttcaact
ttatccaactggacatacgaatttgacaaatgggctccttctgtggtgaaaatatcttac
aaggggacacctgccatgcgtcgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacatattcttgctaagattcga
tggaaatacatgatagtagatgaaggtcatcgaatgaagaaccatcactgcaagctgact
caggtcttaaacactcactatgtggcccctaggaggatactgttgactgggactccactt
cagaacaaattgcctgaactctgggctcttctcaacttccttctcccaaccattttcaag
agctgcagcacgtttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagagactatcctgatcattcgtcgtctccacaaagtgctccggcca
tttttgctaaggagactgaaaaaagaggttgagtcccaactgccagaaaaggttgaatat
gtaatcaaatgtgacatgtcagctcttcagaaggttctgtaccgtcacatgcaagccaag
ggaatccttctcacagatgggtctgagaaagacaagaagggaaaaggtggggcaaaaact
cttatgaacacaatcatgcaattgagaaagatatgcaatcacccgtatatgtttcaacat
attgaggaatcctttgctgaacatttaggctactcaaatggtgtcatcaatggagctgag
ctttatcgggcctcagggaaatttgaactacttgatcgtattttacctaagttgcgagcc
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgactgttatggaggac
tattttgcatttcgaaatttcctttacttacgtcttgatggtacaacaaaatcggaggat
cgagctgccctgctgaaaaagtttaatgaaccgggctcacagtacttcatcttcttgctg
agtacaagggcaggagggctgggcttgaaccttcaggctgctgacactgttataatcttt
gatagtgattggaatcctcatcaggacttgcaggcccaagatcgagctcatcgaattggt
cagcagaatgaggttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtataaactgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaaatcttcaagccatgagcgaagggcttttctacaggctatattagaacatgag
gaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatgattgct
cggcatgaagaggaatttgatctcttcatgcgcatggacatggatcgtcgtagggaagat
gccaggaaccccaagcgcaagccccgcttgatggaggaggatgaattgccatcttggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaggaagaggaagagaaaatattt
ggaagagggtcccgtcagcgcagggatgtggactatagcgatgctcttacagagaaacag
tggctacgggcaattgaagacggcaatttggaagaaatggaagaggaaatccggcttaaa
aaacggaagagacgaagaaatttggataaggattctgggaaagaggatggggagagagca
aagaaaagaagagggaggcctcctgcagagaagttgtcacccaacccacctaaattgaca
aaacagatgaatgccattatcgatactgtgataaactacagagacagttcaggacggcag
ctaagtgaagtcttcattcaactcccatctagaaaagaattaccagagtattatgaatta
attaggaaaccagtggacttcaaaaaaataaaggaaagaatttgtaaccataaatatcgg
aacctcagtgatctggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaat
ttggagggatcacagatctatgaggattccatcgttctccagtctgtattcaaaagtgca
cgacagaagattgccaaagaagagagtgaggatgaaagcgaggagagcgaggaggaggag
gaggagtcagaatcaaaatcagtgaaagtcaagatcaagctgaacaagaaggatgaaaaa
aaatgggacaaaagcaaaggcaagaagaggcaaagacgagtaaaagccaagcctgttgtg
agtgacaatgacagcgatgaggatcaagataaaaacgaccagtcagaagcaagtggaagt
gatgatgagtaa
DBGET
integrated database retrieval system
