Rissa tridactyla (black-legged kittiwake): 128902044
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Entry
128902044 CDS
T09443
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04137
Mitophagy - animal
rtd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128902044
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128902044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128902044
03009 Ribosome biogenesis [BR:
rtd03009
]
128902044
04131 Membrane trafficking [BR:
rtd04131
]
128902044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128902044
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128902044
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128902044
Membrane trafficking [BR:
rtd04131
]
SNARE
SNARE associated proteins
Others
128902044
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128902044
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128902044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
128902044
NCBI-ProteinID:
XP_054040344
LinkDB
All DBs
Position
W:complement(18457114..18482525)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
TGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggatccgattctaaagcagatgacttatcaactgctattctgaagcagaag
aacaggcccaataggttaattgttgatgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaaaatggatgaattacaactgttcagaggagacactgttctgctaaaa
ggaaagaagaggagagaagcggtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgcaacaatttgagagtgcgcctgggtgatgtgatc
agcatccagccttgtccagatgtgaaatatggcaaacgtatccatgtgctgccaattgat
gacacagtagaagggatcacggggaatctgtttgaggtctatctcaagccgtacttcctg
gaagcatacagacccatcaggaaaggtgacatcttcttggtgcgtggaggaatgcgtgca
gtggagttcaaagtggtggagacagatccaagtccttactgcatagtggctccggacaca
gtgatccattgcgaaggagagcccatcaaacgagaggatgaagaagagtcgttgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gaacttcccctccgacaccctgcactcttcaaggccataggggtgaagcctccacgtggg
atcctactgtatggtcctcctggcactggtaaaacactaattgcccgagcagtggccaat
gaaacaggggctttcttcttcctgatcaatggtcctgagatcatgagtaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcctgccatc
atcttcattgatgaattggatgccattgctcctaagagagagaagacacatggagaggtg
gaacgtcgcatagtgtctcagctgttgactcttatggatggactgaaacagagagcacac
gtgatcgttatggcagctaccaacagacctaacagcattgacccagcactcaggcgattt
ggtcgttttgacagagaggtagatatcggtatcccagatgctaccgggcgcctggagatc
ctgcagatccacacgaaaaatatgaaactggctgatgatgtggatctggaacaggtggca
aacgaaacccacggccacgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaagacgaaaccatcgatgctgaa
gtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttcgagagactgtggtggaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggaacttgtacagtatcctgtggagcaccca
gacaagttcctcaaatttggcatgaccccatcaaaaggagttctgttctacgggccacct
ggttgtggtaaaacactgctggccaaagccattgccaatgaatgccaggcaaacttcatt
tccatcaaggggccagaattgctcaccatgtggtttggtgagtctgaagctaacgtgcgt
gaaatctttgacaaggcccgccaagcagccccttgtgtgctcttctttgatgagctggac
tccattgcaaaggctcgaggtgggaatattggagatggtggtggtgctgcagaccgtgtc
atcaaccagatcctgacagagatggatggcatgtccaccaagaaaaacgtcttcatcatc
ggtgccaccaacaggccagacatcattgacccagccatcttgcgccccggccgcctggat
caactcatctacattcccctgcctgatgagaagtcacgggttgctattcttaaggccaac
ctgaggaaatcaccagttgccaaggatgtcgacctggatttcctagctaagatgaccaat
ggcttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccattcgt
gagtccattgagagtgagatcaggcgagaacgtgagaggcagaccaacccttctgccatg
gaagtggaggaggatgacccagttcccgagatacgcagggatcattttgaggaggccatg
cgctttgctcgacgttctgtcagtgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggcttcggcagcttcaggttcccatcaggtaaccagggcggt
accggtccgagccaaggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaat
gacgatgatctctacggttaa
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