Rissa tridactyla (black-legged kittiwake): 128902058
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Entry
128902058 CDS
T09443
Name
(RefSeq) DNA polymerase iota-like isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128902058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128902058
Enzymes [BR:
rtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128902058
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
128902058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
Motif
Other DBs
NCBI-GeneID:
128902058
NCBI-ProteinID:
XP_054040363
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Position
W:complement(1755488..1765091)
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AA seq
761 aa
AA seq
DB search
MEPGPPPTERPQPPQQQPREEEEEEEEEDWLRPQPGGAAASPAPSKAAPARSTGRRVIVH
LDLDCFYAQVEMIRNPELRDKPLGVQQKNIVVTCNYEARKCGVKKLMSVRDAKEKVPQLT
LVNGEDLTPYRETSYKVTELLGEFCPLVERLGFDENFVDVTEIVEKRLNQLQQSGCSRVC
VSGHVYNNQAINLQDTTHVRLVIGSQIAEELREAIYARLGLTGCAGVASNKLLSKLVSGT
FKPNQQTVLLPESCQDLIRGLEHIQKVPGKRGAASIDGEHFDKFYLGIGYKTAKRLETLG
VRNVCDLQAFPSAVLEKELGVSNAQRIQKLSYGEDDSPVTPSGPPQSFSDEDSFKKCSSE
VEVKEKIEELLHNLLDRIDKDGRQPHTVRLTIRQFSSTNKWFNRESRQCPIPPHLIQKFG
KESSNIISPLVDILMKLFRKMIDVDLPFHLTLLSVCFSNLKDLPSSKKGSIGFYLKQMSP
PSGSSKRVREEEDVSHGEGSASWNQSCNRTGTTKTRKLSEEKRSNIKKAGIPDFPFHLFP
ADIDEEVFRELPEDIKKEILSEKTEVILAENISGQPSICFAEEAYSTSPNSKGLNSDRRS
AGCSTISAHESATALAYGSRASCSSECPRSALSSSSMEKQPPDSQDFRARDLSPLEAGAS
QSVLRVPIWDKDKQAFETTSEDKACSRKAGVVFPPNVDTKTFYELPAGVQEELLAEWKNQ
EPGPKTSRDKPPEKPKANKGRKNTAPCLSQSNSLLRYFKPQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcccgccgcccacggagcggccgcagccgccgcagcagcagccccgggag
gaggaggaggaggaggaggaggaggactggcttcgcccgcagccgggcggcgcggccgcc
tcgcccgccccgtccaaggctgcgccggccagaagcacggggcgcagggtgattgtgcac
ctcgacctggactgcttctacgcacaagtagaaatgatccgtaaccccgagttaagagac
aagcctttaggtgtgcaacagaaaaacattgtagttacctgtaactatgaagccagaaaa
tgtggagtgaagaaactgatgtctgtgagggatgctaaagagaaggttcctcagctgaca
ctggttaacggagaagatctaactccatacagggaaacatcgtacaaggttacagagttg
ttgggggaattttgtcctctggtggaaaggcttgggtttgatgaaaattttgtggatgtc
acagagattgtagagaaaagactaaaccagctacagcaaagtggatgttccagagtctgt
gtgtctggccatgtgtacaacaaccaagctataaatctgcaggatacaacgcatgtaaga
ctagttattggatctcagattgcagaggagctgagggaagccatatatgcgagactgggc
cttacaggctgtgcaggagtggcctccaacaaattactgtctaaactagtatctgggacc
tttaaaccaaaccagcaaacagttcttctgcctgaaagctgtcaagatctaatacgtggc
cttgagcacatccagaaagtgcctggtaagcgtggtgctgcgagcatcgatggagaacat
tttgacaaattttatttaggcattggctacaaaactgccaaacgtcttgaaacgctgggt
gttaggaatgtgtgtgatctccaagcgtttccgtctgctgtgttagagaaggaacttggt
gtttctaatgctcagcgtatccaaaaactcagctacggagaagatgactcccctgtgact
ccatcaggccctcctcagtcttttagtgatgaagactcctttaaaaaatgttcatcggaa
gtggaagttaaagagaaaattgaagaactgcttcacaacctattagacagaatagacaaa
gatggaagacaaccacacacagtaaggttgaccatacggcagttctcctcaaccaataaa
tggtttaatcgggaaagccgtcagtgtcctattccacctcatctcattcagaaatttgga
aaagaaagcagcaacattatatccccattagttgatatactaatgaaactctttcgaaag
atgatagatgtagatctaccgtttcatcttacccttctgagcgtctgcttctccaacctc
aaagatcttcctagcagcaagaaaggatccattggtttctatctaaagcagatgtcaccg
ccctcaggctccagtaaacgtgtccgggaagaagaagatgtctcacatggtgagggaagt
gcttcttggaaccagagctgcaacagaactggaactacgaaaactaggaaactttcagag
gaaaagagaagcaatataaagaaagcaggaattcctgacttcccatttcatttgtttcct
gctgatattgacgaggaagtcttcagggaacttccagaagatattaaaaaagaaattctt
tctgaaaaaacagaagtgatcctggctgagaacatttcgggccagccatcaatatgtttt
gcagaagaggcgtacagcacttccccaaattctaagggactaaacagtgataggcgctct
gcagggtgcagcaccatatcagcgcatgaatctgcaactgctctcgcatacggctccagg
gccagttgttcttccgagtgccccagaagtgcactgtcaagcagcagtatggaaaaacaa
cctcctgactctcaggatttcagagcgagagatctgtcacctctggaggctggagctagc
caaagtgttctacgtgtccctatctgggataaagataagcaggcctttgaaacaacttct
gaggataaagcttgtagtaggaaagcaggagttgtatttcctcctaatgttgacacaaag
actttttatgaactacccgcaggtgtgcaagaagaactactagctgaatggaagaatcag
gaacctgggcccaagacttctagggataaaccccctgaaaagcctaaagcaaataaagga
aggaagaacacagcaccttgtttatcacagtctaacagtttgttaagatactttaaacca
cagtga
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