Rissa tridactyla (black-legged kittiwake): 128902071
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Entry
128902071 CDS
T09443
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128902071
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128902071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
128902071
NCBI-ProteinID:
XP_054040393
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All DBs
Position
W:29616722..29691543
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AA seq
1069 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAAQPQPSVAESYYQ
TAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPIAAAATVVPSY
TQSATYSTTAVTYSGASYSGYEAAVYSAASSYYQQQQQQQKQAVAAAAAAATAAWTGTTF
TKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNT
NNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVV
TQATSSTSTSASKPTASASNIATSSSSTVNSSVASSAVKILTPTANTPLNTAPNNKTSST
AANIAVKKISTPKINFVGKYRSGNKLQTTGSKPEEMKSAESVKTTTASTVQTQDVKPDTA
AEPVTPTTLAVLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRR
HRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEED
MYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDDR
YVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKSKSKEGDDKKDGSKDRAL
KGVLRVGVLAKGLLLHGDRNVNLVLLCAEKPSKMLLSRIAESLPKQLAVISPEKYDIKCA
VPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAA
LRHAKWFQARANGLQSCVVIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPG
DALRRVFECISSGIILKGGPGLLDPCEKHPFDTLAVMTDQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccggtagtttcgttcacctatgtgcccagccggctgggagaagat
gccaaaatggccaccggcaactactttggtttcacccatagcggggctgctgcccagtat
agccagcagcctgcttcaggtgtagcctattcccatccaactacagttgctagctacact
gtccaccaggcaccggttgctgcgcacaccgttactgcagcctatgctccagcagcagct
acagttgcagtagccaggcctgctccagtagctgttgcagctgctgcaacagctgctgct
tatggaggctatcctacagcgcacacagctacagattatggttatacacagaggcaacaa
gaagcaccaccaccaccaccacctgtcactacacagaattaccaggattcctattcttat
gttcgatctactgccccagctgtagcttatgacagcaaacaatactatcaacaaccaaca
gcaactgctgtggctgctgctgcccagcctcaaccttcagtagctgaatcgtactaccag
acagctccaaaagcgggatatagccaaggggcaactcagtatacccaagcccagcaaaca
cgacaagtgacagctataaaacctgcaaccccaagtccagcaacgactacattttctata
tatccggtatcctctactgtgcagccaatagcagctgcagctactgttgttccatcctat
actcaaagtgcaacgtacagtacaacagcagttacttactctggtgcctcttattccggc
tatgaagctgcagtgtattcagctgcatcatcctattaccagcagcagcagcagcaacag
aaacaggcagtggcagcagctgctgctgctgcaacagctgcttggacagggaccaccttt
actaaaaaggcaccattccaaaataagcaactgaaaccaaagcaacctcccaaaccaccc
cagatccactactgtgatgtttgtaagatcagctgtgctggaccacagacttataaagaa
cacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagcttctcagaacaca
aataacagcagcacttctgctcgtggaactcagaatcagttgcgctgtgagctttgtgat
gtgtcttgtacaggagcagatgcttatgctgcccatatccgtggagccaagcatcagaaa
gtagtaaagttgcacacaaaacttggcaaacccattccttcaactgaacctaatgtggtt
acccaagctacttcctcaacatccacatctgcttccaaaccaactgcctctgcttcaaat
atagcaactagcagcagcagcactgtgaactcctctgttgcatcctctgcggtgaaaatt
cttactcccacagcaaacacaccacttaacacagcacccaacaacaaaacatcttcaact
gctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgttggcaagtac
agaagtggtaataagcttcagacaacaggaagtaaaccggaagaaatgaaatcagctgaa
agtgttaaaacaacaactgcttctacagtacaaacacaggatgtaaaaccagacacagca
gctgaaccagtgactcctacgactcttgctgtcttgcaaagtgatgtccagccagtgggc
catgactatgtggaagaggtaagaaatgatgaaggaaaggtgatccgctttcactgtaaa
ctttgtgaatgcagttttaatgatcctaatgccaaggagatgcacttaaaagggaggcgg
cacagacttcagtataagaaaaaagtaaacccagacttacaagtagaagtaaagcccagt
attcgagcaagaaaaattcaagaagaaaagatgaggaaacagatgcagaaagaagaatac
tggagaagacgagaagaggaagaacggtggaggatggaaatgaggcgatatgaagaggac
atgtactggaggagaatggaggaagagcagcatcactgggatgaccgtcgcagaatacca
gatggaggatatcctcatggtcctccgggacctctaggcctgctgggagttagaccagga
atgcctcctcagccccaaggaccagctcctctgcgccgccctgactcttctgatgatcgc
tatgtgatgaccaaacatgcagctatatatccaacagaggaggaacttcaagcagtccaa
aaaattgtttctattactgagcgtgctttgaaacttgtttctgacaatatgactgaccat
gaaaaaagcaagagcaaagagggagatgacaaaaaagatggcagtaaagacagagctttg
aaaggagttttacgggtaggcgttttggctaaaggtttgctactccatggagaccgaaat
gtcaatcttgttttattatgtgctgagaagccttcaaagatgttactcagtcgtattgct
gaaagtcttcccaaacaacttgcagtaataagtcctgagaaatacgatatcaagtgtgca
gtcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaagttactatc
acactgacatctccagtcattcgggaggagaacatgagggatggagatgtaacctcgggt
atggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgct
ctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtggttatc
atacgtattcttcgtgacctctgtcaacgggttccaacttggtctgattttccaagctgg
gctatggagttgcttgtggaaaaagcaattagcagtgctactggaccacagagtcctggg
gatgcactgagaagagtttttgagtgtatatcttcaggaattatccttaaaggtggtcct
ggccttctggacccttgtgagaaacatccttttgatacacttgctgtaatgacagatcag
caacgagaggatattacttcaagtgcgcagtttgcactgagactccttgcattccgtcaa
atacacaaagttttaggaatggatccgttaccacagatgaatcaacgcttcaacatccat
aataatcgtaaaaggagaagggacagtgatggggtagatggatttgaggcagagggaaaa
aaagacaaaaaagattatgataacttttaa
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integrated database retrieval system
