Rissa tridactyla (black-legged kittiwake): 128902110
Help
Entry
128902110 CDS
T09443
Name
(RefSeq) unconventional myosin-Vb-like isoform X1
KO
K10357
myosin V
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128902110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128902110
04131 Membrane trafficking [BR:
rtd04131
]
128902110
03029 Mitochondrial biogenesis [BR:
rtd03029
]
128902110
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128902110
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128902110
mRNA cycle factors
P-body specific factors
128902110
Membrane trafficking [BR:
rtd04131
]
Others
Actin-binding proteins
Myosins
128902110
Mitochondrial biogenesis [BR:
rtd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128902110
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128902110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128902110
NCBI-ProteinID:
XP_054040472
LinkDB
All DBs
Position
W:3026729..3181099
Genome browser
AA seq
1821 aa
AA seq
DB search
MSAAQLYTKYTRVWIPDPDEVWRSAEIIKDYKEGDKSLHLKLEDETLYEYPIDLQGNELP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYE
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASETNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKELGLTCAEDFFYTSQGGDTSIEGVD
DADDFEKTRHAFTLLGVKESHQTTIFRIIAAILHLGNLEIQGERDGDACSVSSEDEHLNN
FCGLLGVEHSQMQHWLCHRKLITTAETYVKNMSVQQVVNARNALAKHIYAQLFNWIVQHI
NKALHTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EGIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHASSQHFQK
PRMSNTSFIVLHFADKVEYQSEGFLEKNRDTVYEEQINILKASKYQMVADLFQDEKDAAP
TTSVGKGTSKISVRSARPVIKAANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN
DEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYHDFFNRYRVLMKKRDLSKNDK
KQICQTLLEDLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQR
VKYKRLRRAAIVVQRYTRGHLARRLAEHLRRTRAAIIFQKQYRMLRILRAFQRVRNATVT
IQAFARGMFVRRIYRKILAEHKAIILQKYARGWLARTRFRRVRGATIVLQCYYRRMKARQ
ELKALKIEARSAQHLKKLNIGMENKVVQLQRKIDEQNKEYKLLNEQLSTLASAHSSEVEK
LKKELVQYQQGHRGDGNQLVSLQEEMEHLRLELEKALGERKVVEDSYVKEKDLLRKRISD
LEEENALLKQEKEELNSRILCQSQDEFARNTVEENIQMKKELEEERSRYQNLVKEYSRLE
QRYDNLRDEMTIIKQAPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDVIQQVEEVGMEK
AAMDMTLFLKLQKRVRELEQERKKLQTHLERKEQESKKSQVIETKTEVTSDHEDFAYNSL
KRQELESENKKLKNELNELRKAIADRATQNNSSNDIQDGYNLLLNQLKSANEELEVRKEE
VLILRTQIMKAAQQKETGKNMENITTDASWPNSDKHIDQEDAIEAYQGMCETNRLLEAQL
QDQRREHEEEVEALKNEVDAMKEELEKQQQAFLQTLQLSPEAQVEFGLQQEITRLTNENL
DLKEVLEKLEKNEKKLKKQLKIYMKKVQDFEASQATVPAERRQHERNMQVAVQRKEKDFQ
GMLEYYKEDEPLLIRNLITDLKPQTVSATVPCLPAYILYMCIRHADYINDDQKVHSLLTS
TINGIKKVLKKHNDDFQMTSFWLANTCRLLHCLKQYSGDAGFMTQNTPKQNEHCLKNFDL
TEYRQVLSHLSIQIYQQLIKIAEGILQPMIVSAVLENESIQGLSGVKPMGYRNRSSSMAD
GDSSYSLDAIIRQLNMFHSVMCDQGLDPEIVQQVFKQLFYMINAVALNNLLLRKDVCSWS
TGMQLRFNISQLEEWLRGKNLQQSGAAQMLEPLIQAAQLLQLKKKTSEDAEAICSLCTSL
TTQQIVKILNLYTPVNEFEERVTVAFIRDIQTHLQERNDPPQLLLDFKHMFPVLFPFNPS
SITMDSIHLPASLHLEFLNKV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcagctctacaccaagtacaccagggtttggattcctgaccctgatgaa
gtttggagatcggctgaaattatcaaggattacaaagagggagataaaagcctccatctg
aaacttgaagatgaaactctctacgaatatcctattgacctccaaggaaatgagctgcct
ttcctgcgcaatccagatattctggtgggagagaacgacctgacggccctgagctacctg
cacgagcccgcggtcctccacaacctcaaagtcaggttcctcgagtccaaccacatctat
acgtactgtggtattgtacttgttgccatcaatccatatgagcagctgccaatctacgaa
caagatgtcatctacgcgtacagtggccaaaacatgggggatatggatcctcacatcttt
gcagtggcagaggaagcctataagcagatggccagggatgagaagaaccagtccatcatc
gtgagtggggagtctggtgctggaaagacggtctctgccaaatacgccatgcgcttcttt
gcaaccgtcggcggttctgccagcgagaccaacatcgaagccaaagtccttgcgtcgagc
ccaattatggaggcaattggaaatgctaaaacaacgcggaatgacaacagcagtcgcttt
gggaagtacattcagatcggctttgataaaagataccacatcattggtgccaacatgagg
acgtatctgttggaaaaatcccgagtcgtattccaggcggaggacgaacgcaactaccac
atcttctatcagctttgtgcctcggcgagtcttccagaattcaaagaacttggactaaca
tgtgccgaagactttttctacacttctcagggaggtgacacatccatcgagggcgtggac
gatgctgatgactttgagaaaaccaggcacgccttcaccctgcttggagtgaaggagtct
catcagacgaccatttttaggataattgctgccattctgcacctagggaacctggaaatc
caaggggaacgcgatggcgatgcttgtagcgtatcgagtgaggacgagcacttgaacaac
ttctgtggcttgctgggtgtggagcacagccagatgcagcactggctttgccatcgcaag
ctcatcaccacggccgagacctacgtgaagaacatgtccgtgcagcaagtggtgaacgcc
aggaacgccctcgccaagcacatctacgctcagctcttcaactggatcgtgcagcacatc
aacaaggccctgcacaccactgtcaagcagcactccttcatcggtgtgcttgatatctac
gggtttgaaacttttgaagtgaatagctttgaacagttttgtatcaactatgccaacgaa
aagctccagcagcagttcaactcgcacgtgtttaagctggaacaagaagagtacatgaag
gagggaatcccttggactctcatagacttctacgataaccagccctgcatagaccttata
gaggcgaaactcggtatcttggacctactggatgaagagtgcaaggttcccaaaggcact
gaccagaactgggcgcagaagctgtatgaccgacacgccagcagccagcacttccagaag
ccccggatgtccaacacctccttcattgtcctgcacttcgccgataaggtggaataccaa
agcgagggattcctggagaagaacagggacaccgtgtacgaagaacagatcaacatcctg
aaagccagcaagtatcaaatggtagcagacttgttccaagatgagaaggatgctgcaccc
accacttctgtgggaaagggaacatccaaaatcagcgtccgttctgccagaccagtgatc
aaagctgccaataaggagcacaagaaaacggtgggacaccagttccgcaactcgctgcat
ttgctcatggagactttgaacgccaccaccccgcactacgtgcgctgcatcaagccgaac
gacgagaagctcccctttaagtttgatccgaagagagcggtgcagcagctgagagcttgt
ggagtgctggagaccatccgcatcagtgcagctggcttcccatccagatggtcctaccac
gactttttcaatagataccgtgttcttatgaaaaagagagacctctctaagaacgacaag
aagcagatctgtcagaccctgttggaagacctcattaaggatccagacaagttccagttt
ggacgtaccaagatctttttccgtgcaggccaggtggcatatctggagaaactgcgagca
gataagttcagagctgccacaatcatgattcagaagacggtgcggggctggctgcagagg
gtcaagtacaaaaggctgagacgagctgcaatcgtcgtccagcgctacacgcgtgggcac
ttggcacggaggcttgccgagcacctgaggaggacgagagctgccatcatcttccagaag
cagtatcgaatgttgcggatcctccgagctttccagagggtccgcaacgcaaccgtcacc
attcaggcttttgctcggggcatgtttgtcaggaggatttatcgcaagatccttgcagag
cacaaagccatcatcctccagaagtacgcccgtggctggctggcccgcactcgcttccgc
cgggtcaggggtgccaccatcgtcctgcagtgctactaccggcgcatgaaggccaggcag
gagctgaaggcgctgaagatcgaggcccgctcagcgcagcacctgaagaagctcaacatt
ggcatggagaacaaggtggtccagcttcaaaggaagatcgatgagcagaacaaggaatac
aaactcctgaacgagcagctctctacgctcgcgtcagcccattcctctgaggtggaaaag
ctgaagaaggaactggtgcaatatcaacagggccaccggggtgacggcaaccagcttgtc
agcttgcaagaagagatggagcatctccggctggagcttgagaaagctcttggtgagagg
aaagtcgtggaagacagctacgttaaggagaaagacctactgaggaagcgcatatccgac
ttggaagaagaaaatgctctcctgaagcaggaaaaagaggagcttaacagcaggatcctc
tgtcaatctcaagatgaatttgcacgaaacacagttgaggaaaatatccagatgaagaaa
gagctggaagaagagaggtctcgttaccagaacctggtaaaagaatattcgaggctggag
cagagatatgacaatttgcgggatgaaatgactattataaagcaagcaccggggcacagg
agaaacccatccaaccagagcagtttggagtccgattccaattatccatccatttcaacc
tccgagataggagacaccgaagatgtaatacaacaagtggaggaggtcgggatggaaaaa
gccgccatggacatgaccctcttcctaaagctgcagaagcgagtgagggagctcgagcag
gagaggaagaaactacaaacccacctggagagaaaggagcaagagagcaagaaatcccag
gtaattgaaacgaagactgaagtgacttcggaccacgaagattttgcatacaacagtctg
aagaggcaagagctggagtcggagaacaagaagctgaaaaatgaactgaatgagctgagg
aaagctatcgcagaccgagcaacccagaacaactcgtccaacgatattcaggacggttat
aacctcctcctgaaccagctgaaatcggccaacgaggagttggaggtgcggaaggaagag
gtgctcatcctgaggacgcagattatgaaggcagcccagcaaaaagagacgggcaaaaac
atggaaaacatcaccaccgacgccagctggcccaacagtgacaagcacattgaccaggag
gacgcgattgaagcctaccaggggatgtgcgagacgaaccggttgctggaagcgcagctc
caggatcagagaagagagcacgaggaggaggtagaagctctgaaaaacgaggtggatgca
atgaaagaagagctggagaaacagcagcaggctttcctgcagaccctgcagctgtctccg
gaggctcaggtggagtttggacttcagcaagaaatcacgcgtctcaccaatgaaaatctg
gatctgaaagaagtgctggagaagctggaaaagaatgaaaagaagctgaagaagcagctg
aagatttacatgaagaaggtccaagattttgaagcatcccaagccacggtaccggcggag
aggagacagcacgagcgtaacatgcaagttgccgtccagaggaaggagaaagattttcag
ggcatgttggaatattataaagaagacgagccactcctcatccgaaacctcattacagat
ctcaagcctcagacagtgtctgctactgttccctgccttcctgcctacatcctctacatg
tgcatccgacatgcggattacatcaacgatgaccagaaagtgcactccttgctcacctcc
accatcaacggcattaagaaagtgctgaagaaacacaacgatgatttccagatgacatcg
ttttggctggcgaatacgtgtcgcctcctgcactgtttaaagcagtacagcggagatgcg
ggtttcatgacacaaaacacgccgaagcagaacgagcactgtctgaagaactttgacctg
accgagtaccgccaggtgctgagccacctctccatccagatctaccagcagctcatcaag
atagcagagggcatactccaacccatgatcgtgtctgcggtgttggaaaatgagagtatc
caagggctttctggtgtcaaaccaatgggctacaggaatcgctcctccagtatggcagat
ggtgacagctcctacagcttagatgcaatcattcgccagctgaacatgttccacagcgtc
atgtgtgaccagggtctggacccagagatcgtgcagcaggtcttcaagcagctcttctac
atgatcaacgcagtggctctgaacaacctcctgctgaggaaggatgtctgctcatggagc
acaggcatgcagctgaggtttaacataagccagctggaggaatggctgcgtgggaagaat
ctgcagcaaagcggagcagcgcaaatgttggagcccttgattcaggcggcgcagctgctg
cagctgaaaaagaaaacctcggaagatgccgaggccatctgttccttgtgcacgtcgctc
acgacgcagcagattgtaaagatcctcaatctctacactcccgtgaatgagtttgaagag
cgtgtgacagtagctttcatacgagacatacagacgcacttgcaagagaggaacgaccct
ccgcagctgctgttagacttcaagcacatgttcccggttttgttcccgttcaacccatcc
tccataaccatggactctattcatctcccagcttctctccacttggaatttctcaataaa
gtctga
DBGET
integrated database retrieval system
