Rissa tridactyla (black-legged kittiwake): 128902230
Help
Entry
128902230 CDS
T09443
Symbol
TRIM23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128902230 (TRIM23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtd04031
]
128902230 (TRIM23)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128902230 (TRIM23)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128902230 (TRIM23)
GTP-binding proteins [BR:
rtd04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
128902230 (TRIM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-RING_5
Gtr1_RagA
zf-B_box
MMR_HSR1
zf-RING_2
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
128902230
NCBI-ProteinID:
XP_054040767
LinkDB
All DBs
Position
Z:63764484..63796066
Genome browser
AA seq
583 aa
AA seq
DB search
MAAVGVNKVGAGAGPEGSRGSGGSSSGRSPAGAAVKVLECGVCEDVFSLQGDKVPRLLLC
GHTVCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGPAGQCG
TAEEAIGLSGESIIRCDEDEAHIASVYCTVCATHLCADCSQLTHSTKTLAKHRRVPLADK
PHEKTMCSQHQVHAIEFVCLEEGCQASPLMCCVCKEYGKHQGHKHSVLEPEANQIRASIL
DMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGVGMAHTEHVPGTAENARSCVRAY
FSDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDC
RVVLAKQEITRLLETLQKQQQQFTELADHVQLDASIPVTFTKDNRVHIGPKMEIRVVTLG
LDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLN
TQAVVFVVDSSHRDRVSEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLS
LHKLCCGRSWYIQGCDARSGTGLYEGLDWLSRQLVAAGVLDVA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcggtgtaaacaaggttggggctggtgctgggccggagggtagtcggggg
tctggtggcagcagtagcggtcgcagcccggctggcgccgcagtgaaggttcttgagtgt
ggagtctgtgaagatgtattttctttgcaaggtgacaaagttccccggctgcttttgtgt
ggccatactgtctgccatgactgtcttacccggcttccccttcatggcagagcagttcgt
tgtccttttgatcgacaagttactgaactaggagattctggtgtctggggcttgaaaaag
aattttgctttgttggaactcttggaacggttgcagaatggacctgctgggcagtgtggg
acggcagaagaagccattggtctgtctggagagagtatcattcgatgcgacgaagatgaa
gcccacattgcatctgtatattgcactgtttgtgccactcacctgtgcgcagactgttcc
cagcttactcattcgacaaagacactagcgaaacacaggcgtgtacctcttgctgataag
cctcatgagaagaccatgtgctcccaacaccaagtacatgctattgagtttgtttgttta
gaagagggctgtcaggcgagtcctcttatgtgttgtgtctgcaaagaatacgggaagcat
caaggtcataagcattctgtcttggaaccagaagcaaaccagattcgtgcatccatttta
gacatggcccactgtataagaactttcacagaagaaatctcggattattccagaaaatta
gttggaattgttcagcatatagaaggaggagaacaaatagttgaagatggagttggaatg
gcccatactgaacatgtaccagggactgcagagaacgctcgctcatgtgtccgagcctat
ttttctgatcttcatgaaaccctttgtcgtcaggaggaaatggctcttagtgttgttgat
gctcacgtgagagagaagttgatttggcttaggcaacagcaagaagacatgaccatcctc
ttgtcacaggtttcaacagcttgccttcattgtgaaaagactttacaacaggatgactgc
agagtagtgttggccaaacaggaaattacaaggttgctagagacattacagaaacagcag
caacagtttacagaacttgcagatcacgtacagctggatgctagcatacctgtcactttt
acaaaggacaacagggtacatattggaccaaaaatggaaattcgtgttgtcactctagga
ttggatggagctggcaaaacaactattttgtttaagttaaagcaagatgaattcatgcag
ccaattccaacaataggttttaatgttgaaacagtagaatacaagaatttgaagtttact
atttgggatgttggagggaagcacaaattgaggcccttgtggaagcattattatctcaat
acacaagcggtggtgtttgttgtggatagcagtcacagagacagggttagtgaagcacac
agtgaacttgcaaaattattaacagagaaggagttgcgggatgccttgctcttgatcttt
gctaataaacaggatgtagcaggtgcactttcagtggaagaaatcacagaactgctgagt
ctccacaaactctgctgtggccgtagctggtatattcagggttgtgatgcccgaagtggt
acaggactttatgaaggattggactggctttcaaggcagttagtggcagctggtgtcctg
gatgtggcttaa
DBGET
integrated database retrieval system
