Rissa tridactyla (black-legged kittiwake): 128902340
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Entry
128902340 CDS
T09443
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128902340 (VLDLR)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128902340 (VLDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
128902340
NCBI-ProteinID:
XP_054041143
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Position
Z:complement(57518264..57545362)
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AA seq
899 aa
AA seq
DB search
MSLQRLGVQVWFCAGVTLFIKLGNFLVSSGGESKKVLLNSIRAYVPFSIEGARAKCEESQ
FQCSNGRCIPLLWKCDGDEDCSDGSDEKACVKKTCAESDFVCVSGQCVPNRWQCDGDPDC
EDGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSPA
EFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVHEFQCKSSTCIPISWVCDDDAD
CSDHSDESLEQCGRQPAPPVKCSASEVQCGSGECIHKKWRCDGDPDCKDGSDEINCPSRT
CRPDQFRCEDGNCVHGSRQCNGVRDCLDGTDEASCNNVIQCSGPGKFKCRSGECIDINKV
CNQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDLVIGYECDCPAGFELIDRRTCGDI
DECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPCLIFTNRRDIRKIGLE
RKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHIRILDNIHSP
AGIAVDWVYKNIYWSDSTAKTISVASLDGTKRKVLFLSELREPASIAVDPLSGFMYWSDW
GEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRR
IVLKSHMFLPHPLALTIFEDRVYWIDGENEAVYGANKFTGSELVTLVNNLNDAQDIIVYH
ELVQPSGRNWCEENMANGGCSYLCLPAPQINEHSPKYTCACPVGYFLKEDGLRCAVSGTG
TTVAYTEAKDTSTTEKSPTLGLVPGEFNISGTASATPASGGTSAAWTVLPVLLLVVAAVA
GYFMWRNWQHKNMKSMNFDNPVYLKTTEEDLTIDIGRHSASVGHTYPAISVVSTDDDTL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacaaagacttggagttcaggtctggttttgtgctggtgttacactgtttatt
aagctgggtaacttcttggtcagcagtgggggggaaagcaagaaagtattgctaaacagt
atcagagcttatgttcctttttctattgaaggtgccagagcaaaatgtgaggaatcccaa
ttccagtgtagtaatggacgctgtattcctttactctggaaatgtgatggtgatgaagac
tgttcagatggcagcgatgagaaagcttgtgtgaagaagacatgtgctgaatctgatttt
gtgtgcgtcagtggtcagtgcgtccctaacagatggcagtgtgatggggatccagactgt
gaggatgggtctgacgagagtgctgaactgtgccatatgagaacatgccgagtaaatgaa
atcagctgtggtcctcagtcaacccagtgtatcccagtgtcctggaaatgtgatggtgaa
aaagactgtgacagtggagaagatgaagagaattgtggcaatgtgacttgtagtccagca
gagttcacatgcagcagcgggcaatgtatttccaagagctttgtctgcaatggtcaagat
gactgcagcgatggcagtgacgagctggagtgtgcacctcctacctgtggagttcatgag
ttccagtgcaagagctccacttgcatccccatcagctgggtgtgtgatgatgatgctgac
tgctctgaccattcagatgaatctctagagcaatgtggccgccagcctgcacctcctgtg
aagtgctctgccagtgaggtgcaatgtggctcaggtgaatgtatccacaaaaagtggcgc
tgtgacggggatcctgactgcaaggatggaagtgatgaaatcaactgcccttctcggacc
tgcagaccagaccagttcagatgtgaagatggtaactgcgtccatgggagtaggcagtgc
aatggtgtgagagactgtctggatggcactgatgaagcaagctgtaacaatgttattcag
tgctctggacctggcaaattcaagtgcagaagtggagaatgcatagatatcaataaagtg
tgtaaccagcagagagactgcaaggactggagtgatgagcccctaaaggagtgtaatata
aatgaatgtctggtgaacaatggtggatgctctcatatctgcagagatctcgttattggc
tatgaatgtgactgtccagctgggtttgagcttatagacaggagaacctgtggagatatc
gatgaatgccagaaccctggtatctgtagtcaaatctgtatcaacctgaaagggggctac
aaatgtgaatgtagccgtggctatcagatggatcttgctactggagtgtgcaaggcagtt
gggaaagaaccatgtctaattttcaccaaccgccgggatatcaggaagatcggtcttgag
aggaaagaatacattcagctagtagagcagctaagaaacactgtagctctagatgctgat
attgctgagcaaaagctttactgggctgacttcagccaaaaagcgatcttcagtgcctct
attgatacccgtgataaagttggaacacacatcagaatcctggacaacatacacagccct
gcgggaattgccgttgactgggtttataagaacatctactggtctgactcaactgcaaag
accatttcagtggctagcctagatggcacaaaaagaaaggttttgtttctctctgagctg
agagagccagcttctattgctgtagatcctctctctggctttatgtactggtcagactgg
ggtgagccagcaaaaattgaaaaagcaggaatgaatggatttgacagacagcagcttgtg
acaacagaaatccagtggcctaatggaattgctctagatcttgtaaaaagccgtctgtac
tggcttgattccaaactacatatgctgtcaagtgtggacttgaatggccaggaccgtaga
attgtgctgaagtctcatatgttccttcctcatcctcttgctctaacaatatttgaggac
cgtgtgtactggattgatggagagaatgaggcagtctatggtgccaacaaatttactgga
tctgagttggttaccctagtgaacaaccttaatgatgcacaggacatcattgtgtatcat
gaactcgttcagccttcaggcaggaactggtgtgaagagaacatggcaaatggaggctgt
agctacctgtgcctgcctgctcctcagataaatgaacattctccaaagtacacttgtgca
tgtcctgttggatacttcttgaaggaggatggtctgagatgtgctgtttcaggtactgga
acaactgtggcttacactgaggctaaagataccagcacaacagaaaaatctccaactctt
ggactagttcctggagaattcaacatcagtggtacagcatctgcaacacctgcctctgga
ggaacatcagcagcttggactgttcttcctgtcttattgctggtggtggccgcagtcgct
ggctacttcatgtggcgtaactggcagcacaagaacatgaagagcatgaattttgataat
cctgtctacctgaaaactacagaagaggacctcacaattgatattggaagacacagtgct
tcagtaggacacacctaccctgcaatatctgttgtaagcacagatgatgatacgttgtga
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