Rissa tridactyla (black-legged kittiwake): 128902480
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Entry
128902480 CDS
T09443
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128902480 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128902480 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128902480 (ZCCHC7)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
128902480 (ZCCHC7)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
128902480 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
128902480
NCBI-ProteinID:
XP_054041573
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Position
Z:complement(240769..356091)
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AA seq
575 aa
AA seq
DB search
MFVGYEDNEDTDVYEDELYNEESSSEQSIDSEVEFHLYSQIHYSQNLGEMSTLEMDEEAD
VAGAMDDSSVLTEKRCEDEKITELTDCGTQVSHDPEVIVLSDTPDEDSVYKSKVKKSTSS
SSQGKIHIPPGSSTPNHAKAVGCNTLYAAGSGTDISRQRGSAGGKLDPVSSAGADAIQDV
FVIDDSSEEESLLSESDNVETWMLLGAGADDGDEDIMLNLEGCATPVSEGEVGVDWSICN
KDLEAQISNYASVRHSGMRYYTADKNVTCKNCSRRGHLSKNCPTPKKVPPCCLCAGRGHL
QNSCPARFCLNCCLPGHYFRECLERAYWNKHCNRCDMKGHYADACPEIWRQYHLTTKPGP
IKAASSHPERSALVYCYNCSRKGHFGYECSEKRMHGSMFPTSPFIYYYDDEYDIKKRASR
LQRKAAELQEAGLLPEQSETPRQEEKHGGHSRKKKSKPWKEHGKHNKHGMCHKKIKLSRA
EKSREEKHRSDFQISHNLEEDFPRGCKRQAYKGSKIRHKSIFQAFSGSKTAYVQEPLEGA
KRKKKWKKQKDASPDLAENLFLIKQRRKKSKQKSL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttggatatgaagacaacgaggatactgacgtgtatgaagatgaactttataat
gaggagtcatccagtgagcagagcattgatagtgaggtggaatttcatctctatagccag
atccactattcccaaaatcttggagaaatgagcacactggaaatggatgaagaagctgat
gttgcaggagccatggatgatagttcagttctaactgagaaacggtgtgaagatgagaaa
atcactgaattgactgattgtggtactcaggtttcacatgaccctgaggtcattgtcttg
tctgatacaccagatgaagacagcgtttacaaaagcaaagtaaagaagtcaacaagctct
tcatctcaaggtaaaatacatatccctccaggatcttccacgccaaatcatgccaaagct
gttggatgtaataccctgtatgctgctggatcgggcactgacatttcaaggcaaagggga
agcgctggtgggaagcttgacccagtgagttctgctggagctgatgccatccaagatgtg
ttcgtaatagatgacagctcggaggaggagagcttgttatctgaaagtgataatgtcgag
acctggatgcttttgggagccggtgcagatgacggagatgaagatataatgttgaacctt
gaaggctgtgcaactcctgtcagcgaaggagaagttggtgtggactggtccatctgtaat
aaagacttagaggcacagatctccaactacgcaagtgtgaggcatagcggtatgcggtac
tacacagctgataaaaatgtgacctgtaaaaactgcagtagacgaggtcatttgtccaag
aactgtcctactccaaagaaagttcccccttgctgcctgtgtgcaggaagaggccatcta
caaaacagttgcccagcacgtttttgtttgaactgctgtttgcctggccactatttcagg
gaatgcctcgagagagcctattggaataaacactgcaatcgctgcgacatgaaggggcat
tatgctgatgcttgcccagaaatatggaggcagtatcacctaacaacaaagccaggacca
atcaaggcagccagttctcaccctgagcgctctgctttagtgtactgctacaactgttcc
cgcaaaggacacttcggatatgagtgctcagaaaagcggatgcatgggagcatgttccct
acttctccattcatctactactacgatgatgaatacgatatcaagaaaagagcaagcaga
ttacaaagaaaggctgcagaactgcaggaagccggccttctgccagaacagtcagagaca
ccacggcaggaagaaaaacatggggggcacagccgtaagaaaaagagcaagccttggaaa
gaacatgggaaacataacaaacatggcatgtgtcacaaaaagataaagttgtcccgggca
gagaaatccagagaagagaaacacagaagtgattttcaaatcagccacaatctggaagag
gacttccccagagggtgtaaaaggcaggcttataagggcagcaaaatccgtcacaagtcc
attttccaggcgttctcaggcagcaagactgcatatgtgcaggagcctctggaaggtgcc
aaaaggaagaagaaatggaaaaagcagaaagacgctagtcctgatctcgctgagaattta
ttcctcataaaacagaggaggaagaagtccaaacagaaatccttgtga
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