Rissa tridactyla (black-legged kittiwake): 128902493
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Entry
128902493 CDS
T09443
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd02010
ABC transporters
rtd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128902493 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128902493 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtd02000
]
128902493 (ABCA1)
Transporters [BR:
rtd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128902493 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128902493
NCBI-ProteinID:
XP_054041605
LinkDB
All DBs
Position
Z:32653864..32753888
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKFGNSSGSDLKLRDFLVDNETFSDFLHHNVSMPSSAVEELLDAEVNL
QQVIVSGYRMRLRDLCNSSTLSEFLTIHNQTAAMDSEVFICTLPKEKLHAAEQTFRANLN
PLKPLQRRFSFNSSLRDLSETVETLKESIGNLVKELLSMKSWSDMRQEVMFLNNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMTEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPSSNWTVEDVARFLSNHQEDFETANG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFT
EIAPNSVELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGSEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQERQHPHADQKGSSEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAVDV
GLPHKLKARTNKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQMEWTTA
SVPDSVLDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcttcc
attgtttcccgcctgttctcagatgccaagaggttacttttgtacagtcaacaggacaca
agcataaaagatgtccagaaggtcttgggaaaactgcgcaagttcggaaactcctctggt
tcagacttgaaacttcgggatttcctggttgacaacgagacgttctcagacttcctgcac
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcagaggtcaacctc
cagcaggtcattgtgtctggttaccgaatgcgactgcgagatctctgcaatagctcaacg
ctgtctgaatttcttacaatccataatcagacggcggccatggactctgaagtctttatt
tgcaccttgccaaaggaaaaactccatgcagctgagcaaaccttccgtgctaacctgaat
cctttgaagcctcttcagagacgattttctttcaattcctccttgcgggatctgtccgaa
actgtggaaactttgaaagagagcattgggaatcttgttaaagagttgctaagcatgaag
agctggagcgacatgaggcaagaggtgatgttcctgaacaacgtgaatgcctcaaactcc
tctacacagatctaccaggctgtgtcgcgcattgtgtgtggccatcctgaaggtggagga
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagacgatgtaactaacttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
ccgttgctgattgggaagatcttgtacactccagacacaccagctgtaaggaaggtcatg
actgaggtgaacaggacgttccaggagctgggtgtgtttcgtgacctcggggggatgtgg
gaggagataagcccgaagatttggacgtttatggaaagtagtcaggaaatggatctcatt
cggacgctgctgaaaggcaaggctctatgggacctgcacttgccatcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaaccaccaggaggactttgagacagcaaacggc
tcagtgtatacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggataaactggagcctgtggccacagaagttcggctt
ataaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctaacagtgtagagctccctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggacaaacaagatcaaggacgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtttggggaggctttgcctacctgcaggatgtg
gtggaacaggccatcatcagggtgcagacaggctcagagaagaagacaggagtttatgtg
cagcagatgccctacccatgttatgtggatgacatatttctgcgtgtcatgagtcgctcc
atgcctctcttcatgactctagcctggatctactctgtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaggagacgatgaggattatgggacttgacaatggc
atcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggtctg
ctggtgctgatccttaagatgggaaatctgctgccttacagtgaccctagtgtggtgttt
gttttcctgtcgatctttggtgttgtgaccatactccagtgcttcctcatcagcactgtg
ttctccagagccaacctggcagctgcctgtgggggcattgtctatttcacgctgtacctg
ccttatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatttttgcg
agcctgctgtctccggtagcctttggctttggttgtgagtacttcgcactgtttgaagag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatctgctgtcatgatgttgtttgacaccttcctatatggggtcatgacc
tggtacattgagtctgtcttcccaggtcagtacgggattcccaggccctggtactttcct
ttcacaaagtcctattggtttggcgaagaaccacaggagaggcagcaccctcatgctgac
cagaaagggtcttcagaagtctgcaaggaggaagagcctatgcatctgagccttggtgtt
tccatccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctc
accctgaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccatcttgactggcttgtttcccccaacctcgggtacagccttcatc
ctgggcaaagatatccgctctgagctcagcaccatcaggcagaacctgggtgtctgtcca
caacacaatgtgctgtttgacttgctgactgtggaagagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcagtggatgtt
ggtttgcctcacaaactgaaagcaaggacaaacaaactctctggtggcatgcagaggaag
ctttcagttgccttagcctttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccctattctcgcagagggatatgggaattgcttctcaagtatcggcaa
ggccgcactatcattctctccacacaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagcttggaacaggctattatttgaccctggtcaagaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgacgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggaggatatc
ggccatgaattaacctatgtcttgccatacaaggctgctaaagagggagctttcgtggag
ctgttccatgaaattgatgaccgtctctctgatcttggcatttccagctatggcatctct
gaaaccaccctggaggagatcttcctaaaagtggctgatgatagtggtgtggatgcagaa
acctcagatgggacattgccagccagaaggaacaggcgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgattcggacatagatcca
gcagaatccagagagacagacctcctcagcggcatggatgggaaaggctcctaccagatg
aagggctggaaactcacccagcagcagttcatggctctgttgtggaagagactgcttatt
gccaagagaagccggaagggcttctttgctcagattgtactgccagctgtcttcgtgtgt
attgctctcatgttcagcctgatcgttcctccctttgggaagtatcccagcctggaatta
cagccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgca
ggcactcagaggcttttggacgcccttctcaataagcctggttttgggacacgctgcatg
cagggacactccatcccagacactccttgcaccgtggggcagatggagtggaccaccgct
tcagtcccagactcagtcctggacatcttcttgaaaggcaactggagcatggagaaccct
tccccgtcttgcgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggcgggctgccacccccacagcgcgagcaagacactgctgacatcctccagaat
ctgacaggccgcaacatatcggactatctggtgaagacctatgcacagatcattgggaaa
agcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttctctcatgcttcctccgagccatgaagtcactgatgccattaaacaggtgaag
aagatcctggagctagcacaggggagttctggagatcggtttctgaacagcttgtcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggctgg
catgccatcgcctccttcctgaatgtgatcaacaatgccatccttcgggctaacctgcag
cagggcaaaaaccctagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcaacagctctctgaagtggctttgatgaccacctccgtggatgtcctagtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaaacctgtgatctactgg
ctggccaactttgtctgggatatgtgcaactacattgttccagccacgctagtcatcatc
atcttcatctgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctcctttgtg
ttcaaaatccccagcacagcatatgttgtgctgaccagcgtgaacctcttcattggcatc
aatggtagcgtggccacctttgtcctggagctcttcaccaacaacaagctgaacaacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctgggtcggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggaaaggtttggagaaaaccgt
tttgtgtctcctctgtcatgggacctggtgggaaggaacctcttcgccatggcagtagag
ggcgttgtctttttcctcatcacagtgctcatccagtacagattcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaga
cagaggataattagtggaggaggacagagtgacatcttggaaatcaaggagctaaccaag
atttacagaatgaagcgaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggggtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtattttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctgacagggcgagagcacttggagttcttcgcgcttctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatacggagaa
aaatatgctgggaattacagtggaggaaacaggcgcaagctctccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgcgctctgagtgtaatcaaagaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccttgtgtactcgaatggcgataatggtcaat
gggcgattcaggtgtctgggcagcgtccagcatctaaagaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttcttt
gggcatgccttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccag
cttccctcttcaccatcctccctggccagaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtatttgtaaat
tttgctaaggaccaaagcgacgacgaccacactaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
