Rissa tridactyla (black-legged kittiwake): 128902596
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Entry
128902596 CDS
T09443
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03015
mRNA surveillance pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128902596 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
128902596 (NCBP1)
03015 mRNA surveillance pathway
128902596 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128902596 (NCBP1)
03041 Spliceosome [BR:
rtd03041
]
128902596 (NCBP1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128902596 (NCBP1)
Spliceosome [BR:
rtd03041
]
Common components
Common spliceosomal components
Cap binding complex
128902596 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
C24B10_03
Vfa1
Motif
Other DBs
NCBI-GeneID:
128902596
NCBI-ProteinID:
XP_054041853
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All DBs
Position
Z:complement(17075043..17107497)
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AA seq
798 aa
AA seq
DB search
MSRRRHSDDSDGERRGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVL
EADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLK
VNMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSL
PWVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQ
KLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDD
PEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFA
ELFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWF
SHHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLS
PANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGF
TFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNH
PQMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHK
ELEETKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLV
IFQRFIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTA
ELDHHILAVFQQFCALQA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacggcggcacagcgacgacagcgatggtgagcggcgagggcagccccacaag
aggcggaggacgtctgagccgtcggagatcgaggagaggctcgagtcgctcatctgcagg
gtgggagagaagagtaattcatctttggagagcaacttggagggtctagctggtgttttg
gaagctgatctgccaaattacaaaagcaagatactcagaatactgtgtactgttgcacgt
ctgttaccagaaaagcttactgtttacacgacactagttgggttgctgaatgccagaaac
tacaattttggtggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaa
gtcaatatgtataatgaagctgtgcatttagttcgttttctgtcagatcttgtgaattgt
catgtaatagctgcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacag
gaggaagatgtaccccaagtacgatgtgactggtatatgtttgcatttctgtcatctttg
ccttgggttggaaaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtct
cagacagaaagctatttgaaacgccgccaaaagattcacgtacccatgctgcaagtttgg
actgctgataaaccacatccacaggaggagtatttagactgcctttggtctcagattcag
aagttgaaaaaagaccgttggcaagaacggcacattctgaggccctacttggctttcgac
agcattctttgtgaagcgctgcaacacaatttgcctccgttcactcctccgcctcacact
gaagattcagtgtacccgatgccaagggttatttttaggatgtttgactacacggatgac
cctgagggccctgtcatgcctggcagccactctgttgaacgatttgtgatagaagagaac
cttcactgcatcatcaaatcacactggaaagagagaaagacttgtgctgcacagctgttg
agctatccaggaaacaacaagatccctttgaactaccacatcgtagaggtaatatttgca
gaattgttccaacttccatctccaccacacattgaagtcatgtacacaacactcctgatt
gaactgtgcaaacttcagcctggctctttaccacaagttcttgcacaggccacagaaatg
ctctacatgcgtttggatacaatgaatacaacatgtgtggacagatttattaactggttt
tcccaccacttgagcaacttccagttccgttggagctgggaagattggtcagattgtctt
actcaggaccttgaaaagcccaaacccaaatttgtgagagaggttttggagaagtgcatg
cgactctcctatcatcagcgaataatagacattgttcctgcaagtttttctgtcctcagt
cctgctaatccagtatgcatttacaagtatggagatgaaagtaatagatctcttcccgga
tatactgtggcactctgtttaacaatcgcaattaaaaataaggccagtaatgatgaaatc
ttcagcattttaaaagatgtgcctaatccaaaccaggatgatgatgatgatgaaggattt
accttcaaccctctgaaaatagaagtctttgttcagactctgctccatctagctgcaaag
tctttcagccactctttcagtgccctggcaaagtttcatgaagtcttcaaaacgcttgct
gaaagtgatgaggggaaactccatgttctgagggttgtatatgaggtttggaagaatcat
ccacagatgattgctgtgcttgtggacaagatgattcggacacaaattgttgactgtgct
gcagtagcaaactggatcttctcttcagagcttgcacatgattttactaggttttatatc
tgggagatcttacattccacaattcgtaagatgaataagcatgttctgaagattcacaaa
gaactggaggagactaaggcaagattggccaggcagcacaaaagacgagacagtgatgat
gatgatgacgacgatgaccgaagcagcgatcgggaagatggaccactagaagagcagata
gagcgcttgcaggagaaagtagagtcagcccagagtgagcaaaagaatctcttccttgtt
atattccagcgtttcattatgttgttaactgagcacttagtgcgctgtgaaaccggtgga
attgatgtatttacaccttggtacaagagctgtatagagaggctgcagcagatcttcctg
cagcatcaccagataatccagcagtacatggtgaccctggagaacctcctgtttacagct
gaactggaccaccacatactggctgtgtttcagcagttctgtgctctgcaggcctga
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