Rissa tridactyla (black-legged kittiwake): 128902622
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Entry
128902622 CDS
T09443
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128902622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128902622
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
RNases
128902622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
128902622
NCBI-ProteinID:
XP_054041895
LinkDB
All DBs
Position
Z:complement(14499682..14518099)
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AA seq
922 aa
AA seq
DB search
MRPARCFVPSFCSFDGAAGGSRQRPRYRQRALCRGERPSAAAGPSQGVSISSITNEDENT
KQQSKPAEVFPCGNQDGNSKMSPFRSRCVTTKRSRSSSQEIIVIKLQESDDECDLVIDVP
PQTVNKKPRISRKCISGNRDKKMAAEICAETLHDSAIEEMLGCTEEKSEKIITLQRNGKV
LNKSIKLGNVFPKANKIYLPDVNTDTWKVLEERDALAYTKEKHLSSAPSIEAVMQKGILK
EGNAETNIFAKAFVQEHSSNEDCLSRQRVTQSVLCTGYLSKDETTIERPYEEIINTEESQ
SVEENGSNSTPEDTYPYPTYYLNKEESEITLLSSSAEEAEPSGKDTDLSESDDPLEECRR
IFEESEREAQKKDSDKQVHGGNIDLSLLETKAPGQKRRIAHVAKFDVHNKNEMEPFKASP
WQQGHDAEIQQAHWAAMKFPATVKSGQAFIATASQQQKTMSGLSAIPFQSIGPRASVNLL
EVQPIETRSGQLHILLEGNTATAKPCELSVCSVKKTAHVPCKVSTQKKPCVPESGSKVPL
GTRQQYVSCFFAECLKTCSTVNEAIHKALVEEQSVYDRCGSKKMYLHFAVKTLKNLRDHG
QLSNSILSIGAESIKSEKAFTDGALYELLKDYLLTEEQLNENNFPRPNPEKKGSAILPGV
VKTAGYDAFERACCRCGKVYAITSSGQHRRKEECNYHSGRVLEQRVPGGMEKCYSCCEGI
VGSAGCQTAKLHVHDGRRNKLEGFMKTLIKSPPLDGNYGVYAVDCEMCYTTHGLELTRVT
VVDAKLQVVYDTFVKPDGKVVDYDIRLSAAAEDDLKNTTTSLRDVQAILLNLFSADTILI
GHCLENNLFALKLIHGRVVDTSILFPHRLGLPHKRPLASLMADYLRRIRQGDVGGHNSRE
DAIACMELILWKVKSNNKTRKQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgccaggtgcttcgtgccttccttctgctccttcgacggtgcggcgggtggc
agccgccagcggcctcgctaccggcaaagggcgttgtgccgcggggagcggccctcagct
gccgccggcccttcgcagggtgtctctatctcttctataacaaatgaggatgaaaatact
aagcagcagtctaagccagcagaagtatttccttgtggaaatcaggatggtaattcaaag
atgtctccatttagaagtagatgtgtaaccacgaagaggtcaagaagctcttcccaagag
ataattgtcataaaacttcaagaatctgatgatgaatgtgatcttgtcattgatgtgccg
ccacaaactgttaataaaaagccaagaataagtaggaagtgtataagtgggaacagggac
aaaaaaatggctgctgaaatatgtgcagaaacattacatgatagtgctatagaagaaatg
cttgggtgtacagaagaaaaatcagagaaaattatcactttgcagaggaatggcaaagtt
ttaaataaatctataaaactgggcaatgtttttccaaaagcaaacaagatttatttgcct
gatgtaaacactgatacgtggaaggttttggaggaaagagatgcccttgcttatactaag
gagaaacatttatcttcagctccttctattgaggcagtcatgcagaagggaattctgaag
gaagggaatgcagaaaccaatatattcgccaaagcatttgttcaggaacatagtagtaat
gaagactgtctgagcagacaaagagtaacacagtctgtcttgtgtactggttacctgtca
aaagatgaaactacaattgaaagaccttatgaggaaataataaatacagaggaaagtcag
agtgtagaagaaaatgggagtaatagtaccccagaagatacatacccatatccaacttat
tacttaaacaaggaagaaagtgaaataactctgctgagttcatctgctgaggaagcggaa
cccagtggtaaggacacagatctttctgaatcagatgatcctttagaggagtgtcggaga
atttttgaggagtctgaaagagaagcacaaaagaaggacagtgataagcaggtccatgga
ggaaacatagatctcagcttattagaaaccaaagctcctggtcaaaagagaagaattgca
cacgtggcaaaatttgatgtacataacaaaaatgaaatggagccttttaaagcatctcct
tggcagcagggtcatgatgcagaaattcagcaggcacactgggcagcaatgaagtttcca
gctacagttaaaagtggacaagcttttattgctactgcttctcaacagcagaagactatg
tctggattgtcagctattccatttcaaagcattggaccaagagcctctgtaaatttgctt
gaagttcagcccattgagaccaggagtggtcaactgcatatactactagaaggaaacact
gcaacagcaaagccctgtgaactgtctgtttgttcagtcaaaaagactgctcatgtgcca
tgcaaggtttctactcagaaaaagccttgtgttccagaatcaggatccaaagtaccactt
gggacaagacagcaatatgtcagttgtttttttgcagaatgcctcaaaacttgtagcaca
gtgaatgaagctattcacaaggccctggtagaagagcaatctgtttatgatcgttgtggc
agtaaaaaaatgtacctacattttgctgtgaagactctcaaaaatctgagagatcatggg
caacttagtaacagcatattatccattggcgctgaatccataaagtcagagaaagcattt
acagatggggctctatatgaacttctaaaagattatcttctgactgaggagcaattgaat
gaaaataacttccctcggccaaatcctgaaaaaaagggtagtgctatacttcctggggtt
gtaaaaactgctggatatgatgctttcgaaagagcgtgctgtaggtgtggcaaagtatat
gccattacttcttcaggacaacatagacgtaaagaagaatgcaactatcattctggtaga
gtgttggaacaaagagttcctggtggcatggaaaaatgctatagctgttgtgagggaata
gttgggtctgctggatgtcagactgcaaagcttcatgttcatgatggaagaaggaacaaa
ttggaaggcttcatgaagacattaattaaatcaccgcctttagatggaaactatggtgta
tatgctgtggactgcgagatgtgttacacaacccacggcttggaactaactagagtgaca
gtggttgatgctaagctacaggttgtctatgatacgtttgttaaaccagatggtaaagtt
gtagactacgatataagactctctgcagcagcagaggatgatctgaagaataccacgaca
tctcttcgggatgtacaggcaatactgctgaacttgttcagtgcagatacaattttaatt
gggcactgcttagaaaataacttatttgctctcaagctaattcatggcagagtagtggac
acatcaatattgtttcctcatcggctaggtttgcctcacaaaagaccccttgcaagtctg
atggctgactacctcaggagaattcgtcaaggtgatgttggtggtcataattccagggaa
gatgcaattgcttgtatggaactaatcctttggaaggtcaagagcaacaataaaacaaga
aaacagtga
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