Rissa tridactyla (black-legged kittiwake): 128902727
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Entry
128902727 CDS
T09443
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128902727
03036 Chromosome and associated proteins [BR:
rtd03036
]
128902727
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtd03037
]
128902727
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128902727
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128902727
UBL E3 ligases
128902727
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128902727
Cilium and associated proteins [BR:
rtd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128902727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128902727
NCBI-ProteinID:
XP_054042163
LinkDB
All DBs
Position
Z:12963231..12968393
Genome browser
AA seq
1095 aa
AA seq
DB search
MSSPERKWRQRSAPAPGRRRAGLALPGRWRGGTVPVATPPPPPMAEPARRLAEGARRRPP
GEERREAAGSGRCRTRHRLKAAAAPARRGSEGSAANMTPADKEFSEDSNFSPKAGTSKLP
TDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAECPLCKQPFFSIFHTIRA
EDDFKEYILSPLENSSFSSPDGRRFRYRTTLTGERRSSSYPSRRTLSPPDNGILFEGLSS
EPVRQRDGEIQQMLRRLASRRQASAEGRSLRQIQEEDMINFRRALYRTGVRIRSIQDGGR
YRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFA
DDLKPFLLNRTDHFLHEFISFARCPFNLEAYDQHANYDCPAPSYDEGSQSDSSIITISPD
VAYSKGPDNTSSVTGLDQAPWDDETPGPSYSISEEVRATIASPLEMSESSDEDSATKSQR
TKLQTQLQANGDSNDSDSSSDNCVIVGYVKPLAERTPEVVELSSDSEESIREEKKEDVKK
QQPIQCRSWSDSESSRSFSPHSPTYKEDVGSCRSCLSPAVEKTESKDDEKNKCKVKDLSP
RHLSWSPSPGSDTICSPWNHRLPRKGKSRSPQSCSRSSRGSHGHRSRKEHRSKSQSKRKR
SRSRDSSKHKSKRSKKSRAHDSKVSLKSQRGSLSRESTPSREVSRSRSRSKGHSKRRSRS
RDGDRYYVRDNYQSRYQWGYAFCSRKTFGDGYESSSRRRTQSNPFYSRQSASPEYRIRSF
IERTDPHSQRGGRERHYYCYERCRSRSRSSDRSRTPSGGTDRMKSEKPGGKRKYKTRHLE
NAFMESTSLERENDPKKTSSKFGDCYKNEDSLSDNRASSETKRKKKKKKMRSPSVEIVYE
GKATDTTRHLKKKKKKHKKKHRKHHVSNSSHSSPVVITIDSDSSKEPENTECDSSINWTG
TTQINERENESPSSSLGRTGCEDVYRVGEETGRADKKYSTPTKSGHLDGDIRNADDKLQE
TAADQSPTTADTSSNTPHTETVTSHVQEAPAAPSSQLPSPRISFLECPERRPLILTLPKR
LVNRSSWFDFPEEKM
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccccagagcggaagtggcgtcagagaagtgcgccagctcccggcaggcggcgg
gccgggttggcgctgcccggccggtggcgggggggaaccgttcccgtggcaacgccgccg
ccgccgccgatggccgagcccgcacggcgcctggcggagggcgcccgccgccgcccgccg
ggggaggagcgacgggaggctgccggctccgggcgctgccggacgcgacaccggctaaag
gcggccgcggccccggcccgcagggggagcgagggctcggcggcgaacatgactccagca
gataaggagttttcagaagatagcaacttttcaccaaaagccggcaccagcaagctgcca
acagatgcatctcctgactctaaatgccccatctgcttggatagatttgacaatgttgca
tatctagatcgctgcttgcatagattctgtttccgctgtgtccaggagtggtcaaaaaac
aaagcagaatgccctctctgcaagcaaccctttttttccattttccatacgattcgtgct
gaagatgactttaaggagtacatactcagccctttagaaaatagctctttttccagccct
gatggccggagatttcgttaccgtaccacattaacaggggaacgccgctctagcagttac
ccttcccgaaggacgctgtcccccccagataatgggatattgtttgaagggttgtcgagc
gaaccagtgcggcagcgagatggagagattcagcagatgttaaggaggctggcctcaagg
aggcaggctagcgcagagggcagatctctgcgccagattcaggaggaggacatgatcaac
ttccgcagagctctgtaccgtactggtgtgcgtattcgtagtattcaggatggtggccgc
tatcgagacatttcagctgagtttttccgccgcaaccctgcttgccttcacaggttggtt
ccttggttgaagcgagaacttacagtcctgtttggtgcccatggatctttggttaatatt
gtacagcacattatcatgagtaatgtgactaggtatgatctggaaagtcaggcctttgct
gatgatttaaagccatttttgctgaatcggactgatcacttcttacatgaattcatcagt
tttgcccgttgtccttttaacttagaagcatatgatcaacatgccaattatgactgtcct
gcgccatcatatgatgaaggaagtcagtcagactcgtcaattattacaatatctccagat
gtggcatattctaaagggccagataacacttcgtctgtgactggtcttgatcaggccccc
tgggatgatgaaactccagggccttcctattccatttcagaagaggttcgtgcaaccata
gcttctcctctggagatgtcagaaagttctgatgaggactctgctacaaagagtcaaaga
actaaactgcagactcagttacaggctaatggtgactcaaacgacagtgactcttcctcg
gacaattgtgttattgttgggtatgttaagccgttagctgagaggacgccagaagttgtt
gagctgtcctcggactctgaggagtccatcagggaagagaaaaaggaagatgtgaagaaa
cagcagccaatccagtgtcgcagctggagtgacagtgaatcaagcagaagtttctcgcca
cattcccccacatacaaggaggatgtaggtagctgtagaagctgcttgtctcctgcagtt
gagaagacagagtcaaaagatgacgagaagaacaaatgcaaggtaaaagatctgtctcca
cggcacttgagctggagcccctccccagggagtgatacaatatgctccccttggaatcac
agattgcctagaaagggaaagtccaggagcccacagtcctgttcacggagcagtcgaggc
agtcatggccatcggtctaggaaggagcatcgtagcaaaagccaatctaaaaggaaacga
tcgagaagcagagatagtagcaaacataagagcaaaagaagcaagaagtcgagggctcat
gactccaaagtctctctaaaaagccagagaggctctctaagtcgtgagagcactccatct
agagaagtaagcagatcacgatcgcgtagcaaaggccacagcaaaaggagatcaagaagt
agagacggtgatcgttactatgtaagagacaattatcaaagtagataccagtggggttat
gctttctgtagtcgaaagacatttggagatggctatgaatcctccagcaggaggaggact
cagtctaatcctttctactcaaggcaatctgctagtccagaatacaggatacggtcattt
attgaaaggacagatccacatagccagcggggaggccgtgagagacactattactgttat
gaaagatgcaggtcaaggagtcgatcaagtgacaggtcaaggacaccttctggaggaact
gacagaatgaaaagtgaaaagcctggcggaaaaaggaaatataaaactcgccacttggag
aatgcattcatggaaagcacaagtttagaaagagaaaatgaccccaagaaaacttcctca
aaatttggtgactgctacaaaaatgaagacagcctttcagacaatcgagcaagcagcgag
acaaagcgtaagaaaaagaagaaaaagatgaggagtccaagtgtggagatagtctatgaa
ggaaaagcaacagatacaacaaggcatcttaaaaagaaaaagaaaaagcataagaagaaa
caccggaaacaccacgtgagtaactcatcacattcttctccagtagtgattacaattgat
agtgacagtagcaaggagccagaaaataccgaatgtgacagcagtattaattggacaggc
acaactcagataaatgagagggaaaatgagtctccgtcgtcttctctgggaaggacagga
tgtgaagatgtttatagagttggtgaggaaactggaagagcagacaaaaagtacagtact
cctaccaaaagcggacacttagatggtgacattagaaatgctgatgacaaacttcaagaa
acagcagctgatcagagtcctaccacagcagataccagcagtaacacccctcacacagaa
actgtaaccagccacgttcaggaagcaccagcagcgccttccagtcaactgccttccccc
aggatttccttcctagagtgtccagagagacgaccactgatactaacactgccaaagaga
cttgtcaacagatcctcttggtttgatttcccagaagaaaaaatgtag
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integrated database retrieval system
