KEGG   Rissa tridactyla (black-legged kittiwake): 128902744
Entry
128902744         CDS       T09443                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtd03036]
    128902744 (KDM4C)
Enzymes [BR:rtd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128902744 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128902744 (KDM4C)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128902744 (KDM4C)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 DUF7141 PHD_4 LBR_tudor
Other DBs
NCBI-GeneID: 128902744
NCBI-ProteinID: XP_054042186
LinkDB
Position
Z:complement(55724918..55998153)
AA seq 1092 aa
MAAVISDSPPNPSCKIMTFRPSMDEFKEFNKYLAYMESQGAHRAGVAKVIPPKEWKPRKH
YNDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFKQLANSDKYCTPRYVDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGIEEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKAAKLCTCRKDMVTISMDVFVRKFQPDRYQLWKQGKDLYTIDHTKPTPESTPEVKAWL
QRRKKTKNFPKSFQPTRSRSKKLKTPEDKRVSAMVGGAEIITTEAASDGFKVSEEPGKKV
RLVNTGVPSGEEENSSRMHLDQHLLDNVKVAGSIHSDSFSSPIPVLEKTKMEDEDRTDSS
HPFFTCEGSVASMLASDNSSKEESLKSQNQSVSSVPYHKSEGHASEAEKPNNEENVSIED
DVSDLESCGDSLEHRELPVVKKDEEDGMETSSSVEAEKKKISKSWRHPLNKPPARSPMTL
VKQQATSDEELPETTLTEEEVQETETWARPLVYLWQTRGPNFNAEKEYNAACAKKEPHCA
ICTLLMPYYKPDNHDEESPTFREANSAETLMSENEKTKPLIPEMCFIYSEENTENYPSNA
FIEEDGTSLLISCAKCSVRVHASCYGVPSHEIHNEWLCSRCRKEAWTAECCLCNLRGGAL
KQTTDKKWAHVICAIAIPEVRFGNVTERTPIDTSRIPLQRLKLILFELYCFIFPFAFGMI
SYIPKCIFCRQRIKKISGACIQCSYGCCPASFHVTCAHAAGVLMEPDDWPYVVYMTCFRH
KINQSVRAKAREKAITVGQTVIAKHRNTRYYSCRVIGVTSQLFYEVMFDDGSFSLDTFPE
DIVSRDCLKLGPPAEGEVVQVKWPDGKLYGAKYLGTNTAHMYQVEFEDGSQIVMKREEIY
TLDEELPKRVKARFSTASDMRFEDTFYGTDIILGEKKRQRVLSSRFRNEYVDDPGYRTFL
KSSFQKKCQKGL
NT seq 3279 nt   +upstreamnt  +downstreamnt
atggctgctgtcatctcagatagtcctccaaacccaagctgcaaaatcatgacttttagg
ccttcaatggatgaattcaaggagttcaacaaatatttagcttacatggaatcacaaggt
gctcatagggctggagttgcaaaggttatcccaccaaaggagtggaagccgagaaagcat
tataatgatattgaagatttggtgattcctgctccaattcagcagatggtcaccggccag
tcggggctcttcacgcagtacaacattcagaaaaagccaatgacagtaaaggagttcaag
cagctggccaacagtgacaaatactgcaccccaagatacgtagattatgaagatctggag
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgatgaaggtattgaggaatggaatattgcccatcttaatacaatattggat
gttgtaggagaagactgtggaatttctattgagggtgtaaatacaccatatctatatttt
ggcatgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaat
tatcttcattttggggagccaaagtcatggtatgctattcctccagagcatgggaaacgg
cttgaaagactagctcaagggttcttcccaagcagttctcaaggatgtgatgcttttctt
cgccacaagatgactctgatttctccatcaatattgaaaaagtatggaattccttttgac
aaggttacacaagaggcaggagaatttatgattactttcccatatggataccatgcagga
tttaaccatggttttaactgtgcagagtcaacaaactttgccaccatccgatggattgat
tatggaaaagcagcaaagttgtgcacttgtaggaaagacatggtgacaatatccatggat
gtctttgtgaggaagtttcaaccagacaggtaccagctgtggaaacagggcaaggattta
tacaccattgaccatacaaaaccaactcctgaatcaacacccgaagtaaaggcctggcta
cagagaagaaagaaaacaaagaactttcccaagagcttccagcccaccagatcccgatct
aaaaagcttaaaactccagaggacaagagagtatctgctatggtaggtggtgcagaaatc
ataacgactgaagcagctagtgatggcttcaaggtcagtgaagaacctggaaaaaaagtg
agactggtaaacacaggagtgccttctggggaagaagaaaacagtagtagaatgcacctg
gatcaacatttattggataatgtcaaggttgcaggaagcatccattcagactcattttca
agccctattcctgtactagagaaaacaaaaatggaagatgaggacaggacagattccagt
catcctttctttacgtgtgaaggttctgtggcctccatgcttgcttctgataactccagc
aaagaagagagtttgaaatctcagaatcagtctgtttcatcagtaccataccataagtca
gagggacatgcttctgaagcagaaaaaccaaataacgaggaaaatgtctcgatagaggat
gatgtcagcgacctagaaagctgtggagatagcttggaacatagagaactgcctgttgta
aagaaggatgaagaagatggcatggaaacatccagttcagtggaagctgaaaaaaagaaa
atatctaagagttggcgtcatccactaaataaacccccagctagatctccaatgactttg
gttaaacagcaagcaactagtgatgaagaactgcctgaaactaccttaactgaagaggaa
gttcaagagacagagacatgggccaggcctttggtctacctttggcagacaagaggaccc
aatttcaatgctgaaaaagagtataacgcagcttgtgcaaaaaaggaaccacattgtgcc
atttgcactcttctcatgccatactacaagccagacaatcatgatgaagagagtcctact
ttcagggaagcaaactcagcagaaacattgatgtctgaaaatgaaaagactaaacctctt
attccagagatgtgttttatctatagtgaagaaaacactgaaaactatccatcaaatgcc
tttatcgaagaagatggaacaagtcttctgatttcctgtgcaaagtgttctgtacgggtt
catgcaagttgctatggtgttccttctcatgaaatccataatgaatggttgtgttcccga
tgcagaaaagaagcctggacagccgaatgttgtctctgcaatctgagaggtggtgcatta
aagcaaactactgacaagaagtgggcacatgttatatgtgcaattgccatcccagaagtc
agatttggtaatgtcacagaacgtacaccgatagacactagcagaatacctttgcaaaga
ttaaaattgatcctctttgaactgtattgtttcatttttccatttgcttttggaatgata
tcttacattccaaaatgtatcttctgcagacagagaattaagaaaatctctggtgcctgc
attcagtgttcctatggatgctgcccggcctctttccatgttacctgtgcccatgctgca
ggagtgctgatggaacctgatgactggccatatgttgtctacatgacgtgtttcaggcac
aagatcaaccaaagtgtgagagctaaagcacgtgagaaagccattacagttgggcagacg
gtcattgcaaaacataggaatacacgatactatagttgcagagtcataggagtgacatct
caacttttctatgaagtcatgtttgatgatggctctttcagtctggatacttttcctgaa
gacattgtgagcagagactgcctaaagctgggcccacctgcagagggagaggttgtccaa
gtgaagtggcctgatggaaaactgtatggcgcaaaatatctgggaacaaacacagctcac
atgtatcaggttgagtttgaagatggttctcaaatagtaatgaagagagaagagatctat
actctagatgaagaacttcctaagagagtaaaagcacgtttttccacagcctctgacatg
agattcgaggatacgttttatggaacagatattatcttgggagagaagaagaggcagaga
gtattgagttcccgctttaggaatgagtatgtggatgatccaggataccgcaccttctta
aaaagctcattccagaagaaatgccagaaggggctgtaa

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