Rissa tridactyla (black-legged kittiwake): 128902919
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Entry
128902919 CDS
T09443
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128902919 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128902919 (DMXL1)
Membrane trafficking [BR:
rtd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128902919 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
128902919 (DMXL1)
RAVE complex
128902919 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
128902919
NCBI-ProteinID:
XP_054042633
LinkDB
All DBs
Position
Z:19397403..19482045
Genome browser
AA seq
3084 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVICIFEPVSLLKQNSSHHNTLHYQWQKNAQILLEAIAHNLTW
DPTGTRLLTGSSCLQLWSNAPLENPSDNGNAERTDVGLGEWKCIWQCKTASQVSLMKFSP
DGEFFATAGKDDCLVKVWYNTDSWRSAVAPPGTSSEKQAKEVDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYNNGNEPVNFTNNFKRN
TSSKEKVQNALELNLRHFRRGRRRSGAVVAHTGYAPHQQDPHEAHRNIPPHANALCHFHI
AASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKKSFEH
HSPETNTEESNQMDGRSEEEVDENGDEHKGNQEKKELGDEKTTPNFSIVPLSSAIIDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDVESAKQANDSLKSQESPVRLQSRGNADVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPQISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
NTQEKEIPEKKNNLSESGNQQNGFSEKFYLIVIEYTQTHSLLHMWHLHLKSIPVSVDERM
DSNTPEAATQTEELYSSPDPEKIQSPFTQKYQACRANLQSTSWLTLSSKMVYSQELNLPE
GVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVTTESSASSIPEYSAH
SNVTYVWEEWPLLIEDGLLSSSAISVPGRPTEVSCAHTNRLAVAYKQVTSKNSHLSQDFI
MHVSIFECESTGGSSWILEQTLHLDEVGTMLDSGVSIDSNLVAYNQQDISLSHGGNIMPS
TKHLVHLDWMSREDGSHILTVGIGSKLYMFGQLSGKLQEQNGKEIVAVSHSGSTKATTLS
RFVLLRSVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQDLVSTDSY
SGSMPCITSLMKQSQSSASGLHPPKRTLTRSMTSLAQKLSGKRSACDLSTEMEDSGLFEA
AHTLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINETEPNHDKRLRSL
TISASGSTARDPKTFSKTESADYIEIDSVPPLPLYALLAADDDSSHSCSEKSNNQNSQNK
KDVPNDNYEDLFQNTVISTDELVTFDADEDSLKPKVIDLSQYSPTYFGPEHAQVLSRHLL
HSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRLHTFLT
TSLPPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGIGWWVR
NIHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFT
EDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLALVISRLYES
EFEVSSTYKSILQKRILGSAFPGKESSGNMHCDTFLRSMAYWILEDYSKALDTLIKHSVE
DEGDERDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLSE
RRLFFTTAYAHLKAGCPMLALEVLSKMPKVVKRSKSFCRSSSLMDTSKDFSPSSPVKELE
TKDQSSSVDWSQPVLNGLGSSSDCSSGKHSSSTLSFDWSQPSVVFQDEQLKLQSDSDQSD
ENEDSSLVMKDLKPLKKTEKLYETSSSYTESFSIVDDKSILSPSEDIISAQLKFRACLKI
LTVELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYSVEVEEIQSGISVMPEEATL
HENPEDLADQQKNMLQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELIL
LLQESQQEQSIRVPSSPLPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLD
SPPHPDTQNNKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTQRHSL
RTTSLEETVTPNTSPAQWPGITALIRLLNSAGEEAQPSLTVLLCEILTAVYLSLFIHGLA
THSSNELYRIMAHPLNNKMWSAIFGGGAHTPRGEQLQLKTKTGGHFPMPSPHQVVVFSME
CVGFSKSLTAFSTHSPTKSSDDGEKQQKRYRLSSKTSSKESSQSPALPLVDQESPSYKER
FIPPELSIWDYFIAKPFLPSQSKAEYDSEESQESGEDDEDIDGDVFASNSQNQEHSNANS
YSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHAVLKTLQRWEQVLLRRLELY
GGPPQHYISVHASEDAQAAGPALLRHKTLLEPTNTPFRSNSHVALSVKRLWQYLVKQEEI
QETFIRNIFTKKRCLNESLEEHNETMKNSVVEEPIVNKIETDSGYPGGKARIIHKESDII
TAFAVNKANRNCIAIASSHDIQELDVSAILATQIYTWLDDDVEIENKGADDFLVIHARDD
LVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMASHPTLPYYLTGA
QDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPL
TGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGLSSDNRNICLWDTLVSPANSLVHAFI
CHDSGATVLAYAPKHQLLISGGRKGFTCIIDLRQKQQQQLLQSHDSPVKAIAVDPTEEYF
VTGSAEGNIKIWSLSTFNLLHTFINEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTV
KMRILPDRFSPLNDVLKNDVKFMI
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggggcggtgaaccccggggacaactgcttctccgtg
gggagcctgcatgaccagcccttcacggcgtatgcatcaggatgtgatattgtggtattg
gggactgactttgaaagattacagataattcctggagcaaaacatggaaacattcaggtg
ggatgtgtggactgttcaatgcaacaggggaagattgcagcttcttacggaaatgtgatt
tgtatctttgagcccgttagccttttgaagcagaacagcagtcatcataatacattacat
tatcagtggcagaagaatgctcaaatcttactggaagccatagcacataatctaacgtgg
gatcccacaggtactcgccttttgactggttccagttgtcttcagctttggtccaatgct
cctttggaaaacccttctgacaatggcaatgctgaaagaacagatgttggacttggagaa
tggaaatgtatctggcaatgcaaaactgcttctcaagtttcattaatgaaattctcgcca
gatggggagttttttgctactgctggaaaggatgattgtcttgtgaaagtatggtacaac
acagacagctggcggtcagccgtagcaccacccggcacaagttcagaaaaacaagcaaaa
gaagttgatttttcatttgtttatttggctcatcctcgatccgtaaatgcattttcatgg
aggaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttattacccaacgacagtctgttgtat
ggtggtggatacaacaatgggaacgaaccggtgaacttcacaaataacttcaagagaaat
acttcaagtaaggaaaaagtgcagaatgctttagagttaaacctgaggcacttccgacga
ggaaggaggaggtcgggtgctgttgtagcacatactggatatgctccacatcagcaagat
ccccacgaagctcacaggaacatccctcctcatgcgaatgcactttgtcacttccatatt
gctgccagtatcaatccagccacagatattcctctactcccttctatcacatctctgagt
cttggggaaaatgaagaaaaaagtggaccttttgttgtgcactggctaaacaataaagaa
cttcattttaccttatccatggaagtatttttgcaacaacttaagaagagttttgaacat
cattcgcctgagactaacactgaggaatctaatcaaatggatggcagatcagaagaagaa
gttgatgaaaatggagatgaacataaagggaaccaagaaaagaaggaactgggtgatgag
aaaactactccgaatttcagcattgttcctttatcttctgctattattgatcatgaaatt
gaagtactactttctgaatggagtaaaaatgctgacatgctattcagtatacatcctatg
gatggttcactgctggtatggcatgtagactggctagatgaataccagcctggcatgttt
cgccaggtgcaggtgtcatttgtctcaagaattcccgttgcatttccaacgggtgatgca
aactctctttgcagaagtatagtgatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcctct
ggacatagtaaatcaaccaacagtttaaaactaagtatcttcacacccaatgttatgatg
atttccaaacatgcggatgggtcattgaaccagtggctagtgagttttgctgaggaatct
gctttttcaactgtacttagtatttcacataaatcccgatattgtggtcaccgttttcat
cttaatgacttggcttgccactcggtattaccactgctgcttacaacctcacatcacaat
gctctgatttcaccagatgttgagagtgcaaaacaagcaaatgattctttaaagtctcag
gagtcaccagtaagacttcagagtagaggcaatgcagatgtaacatcccaggatcccaat
gcggtttacagtgaacttattctttggagagttgaccctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattctctccatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctactgccttggtgcatactgtaattctccaagt
gcctgctttgtggctagtgatggacagcatttgagattatatcaagctgtaatagatgct
aagaaacttttgtgtgagctctccaatccacaaatttctaaatacgtcggtgaagttttt
aacatcataagtcagcaatctacggctcgcccagggtgtatcattgaactggatgctatc
acagagcttcatggcagaaaaacacagttattccacgtttttcaagaagacttcatttta
aatacccaggagaaggaaattcctgaaaagaagaacaatttatcagaatctggaaaccag
cagaacggattctctgaaaaattctacttaatagtaatagagtatactcaaacccattca
ttactccatatgtggcatttacatttgaagtcaattcctgtctcagtagatgaaaggatg
gattcaaatacacctgaagcagcaacacaaacggaagaattgtattcttcaccagatcca
gagaagatccagtcaccattcactcaaaagtatcaggcctgtagagcaaaccttcagagc
accagctggcttactctgtcttccaaaatggtgtatagtcaggagttgaatttgcctgaa
ggagtggagataataagtgtaaagccgtcagcaggacatctgagtagttcttccatatat
cctgtttgtcgtgcaccatatctgctggctacttcatgctctgatggaaaagttcgattt
tggagatgcagagttaccactgaatcatcagcttcttccattccagaatatagcgcacat
agcaatgtgacatatgtgtgggaagaatggccattactgattgaggatggacttcttagt
agtagtgctattagtgttccaggaaggccaactgaagttagctgtgcacacacgaacaga
ttagcagtagcatacaagcaggtaacatctaaaaatagtcatctttctcaagattttata
atgcacgttagtatttttgaatgtgaatctacagggggttcttcttggattctagaacaa
actcttcacttagatgaggtaggcaccatgctagactctggtgttagtattgatagtaat
ttagtggcatataaccaacaagacatttctctgtctcatggtgggaatattatgcctagc
actaagcacttggtacacttagattggatgtcgagggaagatggttcacatattctaaca
gtaggaattggatcaaaactttatatgtttggtcagctttctgggaaactgcaagaacaa
aatggtaaggagattgttgcagtctcccatagtggcagtacgaaggctacaaccctttct
aggtttgttctgctgcgttctgtcgacttggtttcatctgtagaggggtcacctcctttt
ccagtctccttgtcttgggtgcgtgatggcattcttgtagttggaatggattgtgaaatg
catgtttattcccagtggcagtctccttccaagcaggatctagttagtacagattcctac
agtggaagtatgccatgtataactagcttaatgaaacaaagccagtcatctgcctcaggt
ctgcatccaccaaagcgaaccttgaccagatctatgaccagccttgcacagaaacttagt
gggaaaagatcagcctgtgatctgtctacggaaatggaagattctggtctctttgaagca
gctcatacattatctcccactttacctcagtaccatccatatcaactgttggaactcatg
gatcttggtaaagtacgtagagcaaaagccattctgtcacatctggtgaagtgcattgct
ggagaagttgttgctataaatgaaactgaacctaatcatgataaaaggctcagatctctg
accatcagtgctagtggaagtactgcaagagatcccaaaacattcagcaaaactgagtct
gcagactatattgaaatagactctgttccaccattgcccttatatgctctgcttgctgca
gatgacgattcatctcattcctgctcagagaagtctaataatcaaaatagtcaaaataaa
aaagatgtgcccaatgacaattatgaagatctctttcaaaatactgttataagtacagat
gaacttgttacatttgatgcagacgaagacagtttgaaaccaaaagtcatcgatctttct
caatatagcccaacttactttggaccagagcatgctcaggttctttctcgtcacttgctt
cattcaagcttgccaggtctgactaggatggagcaaatgtcattgatggccttggcagat
acaattgctacaaccagtacagacattggagaaagcagagacagaaatcagggtggagaa
actcttgatgagtgtggtttaaaatttttattggctgttcggcttcacacatttctaaca
acttcacttcctcctgtacatcgagctcaactgcttcaccaaggcttatctactagtcat
tttgcctgggcatttcattcagtagcagaagaagaactactgagcatgctccctgcagtg
cagaaaggagatccaacatggtcagaactcagagctatgggtataggatggtgggttcga
aatatccatagcctgcggaaatgcatagaaaaggtggctaaagcagcctttcagcgaaac
aacgatccacttgatgcagccattttttaccttgcaatgaaaaagaaggctgtgatctgg
ggattatacaggtcccaaaaagatactaaaatgacacagttttttggaaacaacttcact
gaagacagatggcgtaaagcagcattaaagaatgctttttctttgcttggcaaacagcgt
tttgaacattctgcagcatttttcttgttggcaggacacttaaaagatgcagtggaggtc
tgccttgaaaaactgaatgacattcaattggctcttgtaatatcaagactttatgagtcg
gagtttgaagtatctagtacctataaatctatactacagaagagaattttaggaagtgca
tttcctggaaaagagagctcaggaaacatgcactgtgacacttttctgcgaagtatggct
tactggattttggaagattatagcaaggctcttgacactttgattaaacattctgttgaa
gatgaaggagatgaacgagatggctcatcaagttgtaaccctgcagtgtttaacttctat
aactacttaagaacacatcctctcttgctgagacgtcattttggctcttctgatacatct
tccacacacatttgcctaacagtagaaaatggactagctgacaaaatcaacctaagtgaa
agacggctgtttttcaccactgcatatgcccatctaaaagctggttgtcctatgttggcc
ttagaagtgttatcaaagatgcccaaagttgtcaagaggtcgaagtcattctgtagatcc
tctagtttaatggatactagtaaagatttctcgccatcttctccagttaaagaactggaa
acaaaagaccagtcttccagtgttgattggtcacagccagtattgaatggtctagggtca
tcttcagactgttcatcaggaaaacattcaagttcaactctttcctttgactggagccag
ccaagtgtggtattccaagatgaacaattgaaactacagtcagacagtgatcaaagtgat
gagaatgaagattcttccctggtaatgaaagacctaaaacctctgaagaaaactgaaaaa
ttatatgaaacaagttctagctacacagaatcttttagtatagttgatgacaaaagtatt
ctaagtccatcagaagatataatttcagcacagctgaagtttagagcatgcctgaaaatt
cttactgtagagcttcgtacgctgtccactggttatgaggtagatggtgggaagctgagg
tatcagctttatcagtggcttgaaagagaagtggtagctcttcaaaagacctgtgattat
agtgttgaagtagaagagatacagtcaggaattagtgtgatgccagaggaagctacatta
catgaaaaccctgaagatttagctgaccagcaaaaaaatatgctacagaaagaagatttt
cagaaaagacgccaatggcttctgaaataccagtcactcctaagaatgttccttagttac
tgtatacttcatggctctcatggaggaggtttggcatctgtcagaatggaattaattctg
ctattgcaagaatctcagcaggaacagtcaatacgggtaccttccagccctctaccagag
caaagctccatacctctcctatttgcttgcaccgctagtgccaaaacagtggtggctaat
ccattgctacatcttggtaacttaactcatgatatattacatgccataataaacctcgat
tcaccacctcatccagatactcagaacaacaagatatatgtaatgcataccttagcagcg
tcactctctgcttgcatctaccaatgtctttgtgatggccacagctacagctcgtttcaa
gcaaatcagttcactggaacagtgtatcagacagtgctattaactcagcgccattctcta
agaacaacaagcttagaagaaacagtgactcccaatacatcacctgctcagtggccagga
ataacagctctaatacgtctcttgaattctgctggtgaggaagcgcagccaagtctcaca
gttttactttgtgaaattctaactgcagtctacctgagtctgttcatccatggcctagca
acacattctagcaatgaattgtacagaattatggctcatccacttaacaacaaaatgtgg
tctgctatctttggaggaggagctcatacaccccgtggcgaacaactgcaattaaagaca
aaaactggtgggcacttcccaatgcctagcccacatcaggtagtagtgttctccatggaa
tgtgtggggttttccaaatcccttacggccttcagtactcatagtcctaccaaatcttca
gatgacggagagaaacagcaaaaacgttacaggctttcatcaaaaacctcttcaaaagag
agttctcagtcacctgcattgccattggtagaccaagaatctccatcttacaaggaaaga
tttattcctcctgagcttagcatctgggattatttcattgcaaagccttttcttccatca
caaagtaaagcggaatatgattccgaagaaagtcaggaaagtggtgaagatgatgaagat
attgatggagatgtgtttgcatcaaattcacaaaatcaagagcattctaatgcaaattca
tacagttggtcactgatgagattggcaatggttcagctggtacttcacaatttgaagata
ttctaccctttggctggacatgatctttcagagcttcccgttagctccccaatctgccat
gcagttttgaaaacactacagcgctgggaacaagttcttctccgacgtcttgagctatat
gggggtccacctcaacattatatttcagttcatgcttctgaagatgcccaagctgctggt
cctgcattgcttcgccataaaactttacttgagcctacaaacactccattcagatcgaac
agtcatgttgcactgtctgtgaagaggctctggcagtacttggttaaacaggaagaaatc
caggaaacctttatcagaaatatctttacaaagaagcgatgcctaaatgagtcattagag
gagcacaacgaaaccatgaaaaattctgtggtcgaggagcccatcgtcaataagatagaa
acagattcgggatacccaggaggcaaggcaagaataatccataaagagtctgacatcatt
actgcttttgcagtcaataaggcaaatcgaaactgcattgcaatagcatcgagtcatgac
attcaagaattagatgtttctgcaattttagctacacaaatctatacctggcttgatgat
gatgtggaaatagaaaataaaggagctgatgatttcttagttatacatgctcgtgatgat
ctggtaaacgttcagggaaccactccttatactcacagtaatcccggcacacctatcaat
atgccttggcttggtagtacgcaaactggcaggggtgcatctgtgatgctcaagaaggct
attaataacgtcagaagaatggcttctcatccaacattaccatattacctgacaggtgct
caagatggtagtgtaagaatgtttgaatggggtcatgcacagcaaatcacatgttttcgg
tctggtggcaattcaagggtaactcgaatgagattcaattatcaaggaaataagtttgga
attgttgatgctgatggatatataagtttatatcaaacaaattggaaatgttgcccactt
actggaacttcacctaaaccatatttgacttggcagtgtcataacaaaacagccaatgac
tttgttttcatcagttcatcatccttgatagccacagcaggattgtcttctgacaacaga
aatatttgtctttgggataccttggtttcacctgcaaatagcttggtacatgcttttatc
tgtcacgacagcggagcaactgtgctagcatatgctccaaaacatcagctgttaatatct
ggaggcagaaaaggctttacatgcataattgatcttcgccaaaaacagcagcaacagtta
ctccagagtcatgattctccagtcaaagcaattgctgttgatcctacagaagagtatttt
gtcacaggatctgctgaaggcaacataaagatatggagtctgtctacatttaatcttctt
cacactttcatcaatgagcatgctcgacagtctctcttcagaaatattgggacgggagtc
atgcaaattgagacaggaccagcaaatcacatcttctcttgtggtgctgatggaacagta
aagatgagaatcttacccgatagattcagccctttaaatgatgtgttaaaaaatgatgtg
aaatttatgatctag
DBGET
integrated database retrieval system
