Rissa tridactyla (black-legged kittiwake): 128903019
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Entry
128903019 CDS
T09443
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128903019 (RNF180)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128903019 (RNF180)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128903019 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
128903019
NCBI-ProteinID:
XP_054042858
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All DBs
Position
Z:complement(64268433..64343799)
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AA seq
568 aa
AA seq
DB search
MSNQEADVLRCWRCRKYIANSVCLAKCHGKEPSETSQPSAAAQESCNVWHVNLEAIPEWV
KCVIEKAQWTIGKLHCPFCEACLGGFNFVCNTKCSCGQLVNIHFCKTRTDYQPAFSVELA
KSSGKQLPLLKIQPGFSKGTSHEVETAALKIRNQGISYMARNNNGTERLTEALCLEVRAP
GFEMRSKKLPLKALYKKRNLSASYPMNDACTVKPFHRRSRSLDLNIRERLVLSPALYETC
SMGTIYHGQNENPLLYTRSGLQLESNRKDSSSFQDLYRLSADKLLQKRFRVTSFTTLLHR
ETESKCDFEATGQSSGSAIADGSPFVMELSSPTSTLEEEQYITPVGLVQPTSISFNQKLN
KRERNKLKSLRRKQRRRERWLQKQTANDNLHTDDEHELRRDKENYLCAVCLDVYFNPYMC
YPCHHIFCEPCLRMLAKDNPASTPCPLCRTTIARVFFQAELNNSTKSFFPMEYLKLKENF
QKSNSAKWPLPSCKKAFRVFEAGFQRRSHTVTRRHFPHAAHRMDYMDFEDDSRGWRFDMD
MVIIYIYSVNWVIGFIVFCFLCYFFFPF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaagaggctgatgttctacgttgctggagatgtagaaaatatatagccaat
tctgtttgccttgcaaaatgtcatggaaaagaaccatctgaaacatcacaaccttcagct
gctgctcaggagtcttgcaatgtatggcatgtgaacttagaagccatcccagagtgggtg
aaatgtgtcattgaaaaggcacagtggacaattggaaaactgcactgtccattctgtgag
gcctgcttagggggctttaactttgtttgcaacacaaaatgttcctgtggacagttagta
aatatacatttctgcaaaactcggactgactatcagccagctttctctgttgaattggca
aaatcatcaggaaaacagttacctctcctcaaaattcagcctggttttagcaagggtacg
tcccatgaagtggaaactgcagctttgaaaatcagaaatcaagggatttcatacatggcc
agaaataataatggaactgaaagattaacagaagcactttgtctagaagtaagagctcct
ggatttgagatgagaagtaaaaaacttcccttaaaggcattatataaaaaaagaaatctt
tctgcttcctatcctatgaatgatgcctgcactgtaaaaccttttcacagaagatcacgt
agtttggatttaaatatcagagagagacttgttttgtcacctgcgttatatgaaacttgc
agcatgggaacaatttaccatggccaaaatgaaaatccacttctttacacacggagtggc
ttgcaattggagtccaataggaaagatagtagttcttttcaggacctatatagattgagt
gctgacaaactactacaaaaaaggtttcgagttacttcctttactaccttactacataga
gaaacagaaagtaaatgtgattttgaagctactggacaatcttctgggagtgccattgct
gatgggtcaccatttgtgatggagctttcttcacctacaagtactctagaagaggaacag
tacatcacacctgttggtcttgtgcagcctacgagtatttccttcaaccaaaagctgaac
aagagagaaagaaacaagttgaaaagcttgaggaggaaacaaagaagaagagaacgatgg
ctacagaagcaaactgcaaatgataacctgcatacagacgatgagcacgaactcagaagg
gataaagaaaactatctctgtgcagtgtgcctggatgtttatttcaatccttacatgtgc
tatccatgccaccacatcttttgtgaaccttgcttaaggatgcttgccaaagacaatcca
gccagcactccatgtccactgtgtcgcactacaattgccagagtctttttccaagcagaa
ctgaacaactctaccaaatcttttttccctatggaatatttgaagttaaaagaaaatttt
caaaaatcaaattctgcaaaatggcctctaccaagctgcaagaaagccttcagagttttt
gaagcaggttttcaaagacgctcacatactgtaacaaggaggcatttcccacatgctgct
cacaggatggactacatggactttgaggatgatagccgtggatggcggtttgatatggac
atggtgataatctacatttattcagtcaactgggtaataggatttattgtgttctgtttt
ctttgttacttctttttccctttttag
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