Rissa tridactyla (black-legged kittiwake): 128903083
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Entry
128903083 CDS
T09443
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128903083 (DDX4)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128903083 (DDX4)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128903083 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128903083
NCBI-ProteinID:
XP_054042963
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All DBs
Position
Z:complement(67582071..67628851)
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AA seq
696 aa
AA seq
DB search
MAAGGVAVVSSLRPCERGLLLGRRCTVLQAPRFASAKYRCDRGTCLTQCAGATIWHSMNQ
EDWNVELGDEPSGIPPPLQQASFSGRPNGSSSDFRPSVGSFGAVEKPNKNQHIHDHFGGY
SRSRATDECLNTECQPMCRFGSGRNFGNRGFQERNIEDSSTQKRGFRGFPGGFGRSESIK
DEQRDRPQSGVFLGSRGRGAFGGHAAAHRECNEEIESERGPKVTYVPPPPPDDEQAIFAR
YQTGINFDKYDENIVEVSGLNPPAPLLAFEEANLCQTLNMNIAKAGYCKLTPVQKYSIPV
ILAGRDLMACAQTGSGKTAAFLLPIVAHMMRDGVTASSFKEQQEPECIIVAPTRELINQI
FLEARKFVYGTCVRPVVIYGGTQTGHSIRQVMQGCNILCATPGRLLDIIGKEKIGLHNVK
YLVLDEADRMLDMGFGLDMKKLISQPSMPPKDKRQTLMFSATFPEEVRRLAGEFLKTDYL
FVVVGHVGGACSDVHQSILQVPQYSKRDKLIEILQTIDHERTMVFVDTKKKADYIAAFLC
QEKIPATSIHGDREQREREVALRDFRSGKCPVLVATSVAARGLDIENVQHVINFDLPSTI
EEYVHRIGRTGRCGNTGKAVCFFDNSSDGHLAQSLVKVLSDAHQEVPVWLEEIAFGFQGE
QVFTSVNTQKNYRGRGTTNTGGMKMSYSASAFESWD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcggtgttgcggtcgtctcctccctccgtccgtgtgaacgaggtctgctg
ctgggccgccggtgcaccgtgctgcaggcgccgcgcttcgcctccgcgaagtaccgctgc
gaccgcggaacgtgcctgacccagtgcgcgggggctacgatctggcacagcatgaaccaa
gaggactggaatgtggagctgggggatgagccatcaggaattcctccaccacttcagcag
gctagcttctctggaagaccaaatggctcctcgtctgacttcaggccaagtgtgggctca
ttcggtgctgttgaaaaacctaacaaaaatcaacatatacatgatcattttggagggtat
tctaggagtagagctaccgatgaatgtctgaacacagagtgtcaaccgatgtgtagattt
ggtagcggaaggaattttggaaacagaggttttcaagaaaggaacatagaagattctagt
acacaaaaaagaggttttagaggatttcccggtggctttggacgtagtgagagtattaaa
gatgagcagagagacagacctcagtctggcgtttttcttggctctagaggaagaggagca
tttggaggtcatgcagcagctcacagagaatgcaatgaagaaatagaatctgaaagaggt
ccaaaggtgacttacgtgccgcctcctccacctgatgatgaacaagctatctttgcacgt
tatcagacaggaattaattttgacaagtatgatgaaaacattgtcgaagtgtcaggactt
aaccctccagcaccattactggcttttgaagaagctaacctctgtcagactttaaacatg
aacattgctaaagctgggtactgtaaacttactccagtgcagaagtacagcattcctgtt
atactggcaggacgggatttaatggcatgtgcccagacaggatcaggaaaaactgcagct
tttcttttaccaattgtggcccacatgatgagagatggtgtaactgccagtagctttaaa
gagcagcaagaaccagaatgtattattgttgccccaactagagaactgataaatcagatc
ttcctagaagcaaggaaatttgtctatggaacttgtgtaaggcctgttgtgatctatgga
ggtacacaaacaggccattcaattcgtcaggtaatgcaaggctgtaatatactatgtgcc
actccaggaaggcttctagacatcattggaaaagagaagattggtttgcataatgtgaaa
tacttggtgctagatgaagcagaccgcatgcttgatatgggttttggtttagatatgaag
aagctgatttctcaaccaagcatgccaccaaaagacaaacgtcaaacactaatgtttagc
gccacttttcccgaagaagttcggaggctggctggcgaatttttgaaaactgattattta
tttgttgttgttggacatgtgggtggagcttgtagtgatgttcatcaaagtattcttcag
gttcctcagtattccaagagggataagctgatagaaattctacaaacgatagatcatgaa
cgaaccatggtgtttgtagacacaaagaaaaaagcagactacattgcagcctttctttgt
caagaaaaaataccagccactagcatccatggagatagagaacagagagagagagaagta
gctcttcgggattttcgttctggaaaatgtccagttcttgtggcaacctctgtggcagca
agaggtctggatattgaaaacgttcaacatgttattaattttgatcttccttccaccatt
gaagagtatgtacatcgaatcggacgaactggtcgttgtggaaatacaggcaaagcagtt
tgcttctttgataacagttcagatggccatcttgcacaatctctggttaaagtgctttca
gatgcccaccaggaagttcctgtttggttggaagaaattgcttttggttttcaaggagaa
caggtctttacatcagttaatacccaaaagaattacagaggcagaggcaccacaaacaca
ggaggaatgaagatgtcgtattctgcaagtgcatttgagtcatgggattaa
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