Rissa tridactyla (black-legged kittiwake): 128903161
Help
Entry
128903161 CDS
T09443
Symbol
L1CAM
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1
KO
K06550
L1 cell adhesion molecule
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128903161 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128903161 (L1CAM)
04090 CD molecules [BR:
rtd04090
]
128903161 (L1CAM)
04091 Lectins [BR:
rtd04091
]
128903161 (L1CAM)
Cell adhesion molecules [BR:
rtd04515
]
Immunoglobulin superfamily
L1 family
128903161 (L1CAM)
CD molecules [BR:
rtd04090
]
Proteins
128903161 (L1CAM)
Lectins [BR:
rtd04091
]
I-type lectins (Siglecs)
128903161 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
C2-set_2
V-set
Ig_DSCAM-DSCAML_C
BiPBP_C
LEA_3b
Motif
Other DBs
NCBI-GeneID:
128903161
NCBI-ProteinID:
XP_054043081
LinkDB
All DBs
Position
24
Genome browser
AA seq
1279 aa
AA seq
DB search
MSAPRQPQPRAGSGASRPPLPPAPAMALPRGLGLLLLLALGGPGAAITIPPEFLQPPELV
EQPPEQLVVFPSDDIVLKCNATGNPPVQYRWMREDQPFVPEEHPGVTVAPGLGTLVINAS
LAGRLQGRYRCLATNALGTALSLEARVIAENTPQWPKEKVMPVEVEEGDPVVLPCDPPKS
AVPPKIYWLNSRIVHIAQDARVSMGQDGFLYFANALVGDSHPDYICHAHYLGPRTIIQKE
PLDLRVAPSNLVQSRRPRLVVPREPQPPHVALRGGTLVLECIAEGLPTPTVRWQRLNGPL
PRGRASLENFNKTLRLRAVEEADDGEYECVAENSQGQARHSHLVTVEAAPYWVRSPESGV
FGPGETARLDCSVEGKPRPRVTWRLNGVPIEEVPGAGRRAVREGALVLSRLEPNDTLVAQ
CEAYNRHGRLLANAFVYVVELPVKILTPDKTPYAVVENRTVFLHCRTFGAPAPTVEWLTP
ELEPALQDDRAFVFTNGTLRLGPVARGDGGVFTCQAHNPHSNASVAAHLDVKAATRIEVP
PQSTTAKKGETVTFRCVAAFDPGLAPRGLEWRRDGQLLRETADSDKYSLSGDTLTVAGVD
YGDQGTFSCRAWTLLDAVEAEAQLRVVGRPGPVRELQVLEVGERQVRLSWTPGDEHNSPV
EKFVVEEEEGIFTPGRFVERLTVPGGQPWAPLTLSPYGRYRFRVLAANAYGRGEPSAPSA
PISTPPAAPERNPGGVKGEGNETNNLVITWQPLAPGEWNAAEVRYRVQWRGLEPALGRWH
EETVGAPPVVVGGTPTFSPYEIRVQAVNSAGKGPDPPVVIGYSGEDLPLVYPENVGVEIL
NSTSVRVRWSLGGAPQDLRGHLRGFRVLYWREGWVGERMRRQAPPGPPGGHPGVLTVPGE
ASGVLLGGLRPWSRYRLQVVVFNGRGDGPPSDEIRFDTPEGVPGPPEELHVERVNETTLA
LEWKRPRHPNGILTGFLLQYRLESAPEGALPDEISFPAGTRNASLGRLQPRARYRLALRA
ITGPGPGPALLRLGSLLPEPVLPVLGSVEVGEVGEDFTVLHWTLAHPQANIEFEVQYMSK
TTEESWRMSGRANSSLGLYRLGDLRPGTSYRVQFVGRNHSGDPVAFWESVVQTNGTFLPS
PAGGFATEGWFIGFVSAVVLLLLLLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDET
FGEYRSLESDGEEKASGSSGRSLXGRLGAALGSDDSLAGYGGSADVQFNEDGSFIGQYSG
ARATPXSGPASPAAPAPLD
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccgcggcagccgcagccccgagctgggagcggcgcgagcaggcccccgctg
ccgccggccccggccatggctctgccccgggggctcggcctcctcctgctgctggcgctg
ggggggcccggcgccgccatcaccatccccccggagttcctgcagccccccgagctggtg
gagcagcccccggagcagctcgttgtcttccccagcgatgacatcgtcctcaagtgcaac
gccactggcaacccccccgtccagtaccgctggatgcgggaggaccagcctttcgtccct
gaggagcacccgggggtgacggtggccccgggcctggggacgctggtcatcaacgccagc
ctggccggccgcctgcagggccgctaccgctgcttggccaccaacgccctgggcaccgcc
ttgtccctcgaggcccgtgtcatcgccgagaacacgccacagtggcccaaggagaaggtg
atgccggtggaggtggaggagggggaccccgtggtgctgccctgtgacccccccaagagc
gccgtgccccccaagatctactggctcaacagccgcatcgtgcacatcgcgcaggacgcc
cgagtgagcatggggcaggacgggttcctctacttcgccaacgcgctggtgggcgacagc
caccccgactacatctgccacgctcactacctggggccccgcaccatcatccagaaggag
cccctcgacctccgcgtcgcccccagtaacttggtgcagtcccgccgtccccggctggtg
gtaccccgggagccacagcccccccatgtcgccctgcgggggggcaccctggtcctcgag
tgcattgccgaggggctccccacgccgacggtgcggtggcagcggctgaatgggcccctg
ccgcggggccgggcctcgctggagaacttcaacaagacgctgcggctgcgagcggtggag
gaggcggacgacggcgagtacgagtgcgtggccgagaacagccagggccaggcgcggcac
agccacctcgtcaccgtcgaggcggccccgtactgggtgcgcagccccgagagcggggtg
ttcggcccgggggagacggcacggctggactgcagcgtggagggcaagccccggccccgc
gtcacctggcgcctcaatggcgtccccatcgaggaggtgccgggggccggccggcgggcg
gtgcgggagggggccctggtgctgtcccgcctggagcccaacgacacgctggtggcccag
tgtgaggcctacaaccgccacgggcgactgctggccaacgccttcgtctacgtcgtggag
ctgccggtgaagatcctgacgccggacaagacgccgtacgcggtggtggagaaccggacg
gtcttcctgcactgccggaccttcggggcccccgcgcccaccgtcgagtggctgacgccg
gagctggagccggcgctgcaggacgaccgggccttcgtcttcaccaacggcaccctgcgg
ctgggcccggtggcgcggggggacgggggggtcttcacctgccaggcccacaacccccac
agcaacgccagcgtcgccgcccacctggacgtcaaagcggcgacgcggatcgaggtgccc
ccccagagcacgacggcgaagaagggggagacggtcaccttccgctgcgtggccgccttc
gaccccgggctggccccccgcggcctcgagtggcgccgggacgggcagctgctgcgcgag
acggccgatagcgacaagtactcgctgagcggggacacgctgacggtggctggggtggac
tatggtgaccaggggaccttctcctgccgcgcctggaccctcctggacgccgtcgaggcc
gaggcgcagctccgcgtcgtgggccggccgggccccgtgcgggagctgcaggtgctggag
gtgggcgagcgccaggtccggctctcctggaccccgggggacgagcacaacagccccgtg
gagaagttcgtggtggaggaggaggagggtatcttcacccccgggcgcttcgtggagcgg
ctgacggtgccgggggggcagccctgggcccccctcaccctctcaccctacggccgatac
cggttccgggtgctggcagccaacgcctacggccggggggagcccagcgcccccagcgcc
cccatctccaccccccccgcggcccctgaacgcaatcctgggggggtcaagggtgaaggc
aacgagaccaacaacctggtcatcacctggcagccgctggcgccgggggagtggaacgcg
gccgaggtgcggtaccgggtgcaatggcgggggctggagccggcgctgggccgttggcac
gaggagacggtgggggccccccccgtcgtggtggggggcacccccactttcagcccctac
gagatccgggtgcaggcagtcaacagcgccgggaaggggcctgacccccccgtcgtcatc
ggctactcgggagaggacctgccgctggtgtaccccgaaaacgtgggggtggagatcctc
aacagcaccagcgtgagggtgcgctggagcctggggggggccccccaagacctgcgcggg
cacctccgtggatttcgggtgctgtactggcgtgagggctgggtgggggagcggatgcgc
cggcaggccccccccggcccccccggggggcaccccggggtgctgacggtgcccggggag
gccagcggggtgctgctgggggggctgcgcccctggagccgctaccgcctccaggtcgtc
gtcttcaacgggcggggggacggcccccccagcgacgagatccgcttcgacacccccgag
ggagtgccgggcccccccgaggagctgcacgtggagcgcgtgaacgagaccaccctggcc
ctggagtggaagcgcccgcggcaccccaacggcatcctgaccggcttcctgctccagtac
cgcctggagagcgctccggagggggcgctgccggacgagatctccttccccgccgggacc
cgcaacgcctccctggggcggctgcagccccgcgcccgctaccgcctggcgctgcgggcg
atcaccggccccggccccggccccgcgctgctgcgcctcggcagcctcctgcccgagccc
gtgctgccggtgctggggagcgtggaggtgggggaggtgggggaggacttcaccgtcctg
cactggaccctcgcccacccccaggccaacatcgagttcgaggtccagtacatgagcaaa
accacggaggagtcctggcgcatgtcgggccgcgccaactcctcgctggggctctaccgc
ctgggggacctgcgccccggcacctcctaccgcgtccagttcgtggggcgcaaccactcg
ggggaccccgtggccttctgggagagcgtggtacagaccaacggcacctttctgccgagc
cccgcgggcggcttcgccaccgagggctggttcatcggcttcgtcagcgccgtggtgctg
ctgctcctcctcctcctcatcctctgcttcatcaagcgcagcaaggggggcaagtattcg
gtgaaggacaaggaggacacgcaggtggactcggaggcccggcccatgaaggacgagacc
ttcggggagtacaggtccctggagagcgacggcgaggagaaggcctcgggcagctcgggg
cggtcgctgnngggacggctgggggcggcgctgggcagtgacgacagcctggccggctac
gggggcagcgccgacgtccagttcaacgaggacggatccttcatcggccagtacagcggg
gcccgcgcaacgccangctccggccccgccagccccgccgcccccgcccccctcgactga
DBGET
integrated database retrieval system
