Rissa tridactyla (black-legged kittiwake): 128903419
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Entry
128903419 CDS
T09443
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M160-like
KO
K13912
deleted in malignant brain tumors 1 protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Defensin_3
Motif
Other DBs
NCBI-GeneID:
128903419
NCBI-ProteinID:
XP_054043404
LinkDB
All DBs
Position
Unknown
AA seq
2230 aa
AA seq
DB search
MGFRLVNGSTACEGRVEVHVQGTWGTLCASRWDLLDAHVLCRHLNCGFAESIPKGGHFGR
GSGPVWRDSFHCDGTEAHLGECPVTALGALPCSHENDAAVICSARFASLRLVGGGSPCDG
RVEIFQHGTWGRVLDEQWDVQEASVVCRQLQCGEAEAAYNPPKAQRGTGPVGLRGVRCAG
HEANLTLCNTPLPESALEAGIAEDVGVVCWGSRQVRLVNGPGRCAGRVEIYYQGSWGSVC
DDGWDLSDAAVVCHQLGCGGALEAVGSARFGEGSAQIWLESVNCSGAEAALWDCPAGSWG
QHDCGHKEDTGVVCSEFMALRLENGTNCSGRLQVFYNGTWGSVCSNSMTPETVSLACKEL
GCGDRGSLETQRPYGRLSVTAWLDRVECGERNSSFWQCPSAPWHPQSCDDLREETHITCK
GSQPETPPAPMAACPSTPSCTDREKIRAVGGEKGCSGRVEVWHRGSWGTVCDDSWDMRDA
EVACRQLGCGPAVSALAEAAFGEGSGPIWLEQVECRGTEPSLQDCWARPGDSGACRHKED
AAVNCSETSMAELGPVRLEDGGGRCAGRVEVKHQGQWGTVCAFHWEMTNAAVVCKQLGCG
SAVQAHAKAVFGPGSGPIWMDLVYCHGNESALSDCIHRGWGKHNCDHSEDAGVTCSGFVR
LVGGDNPCSGRVEIRDRNKWKTVCDSDFGPKAADVVCRELQCGTALSVPGAAHFGEGAGP
MWDRELQCVGNESLLSSCPTGSPREQPCTHANAAGVTCTRKDSGQGVTTGGLDQVAQSPV
KPDLECLPAALKWCRRRRKAGCPFGLYSTTQGSKSTSLPCLILLCPEFTGFRLVNGSTAC
EGRVEVHVQGTWGTLCASRWDLLDAHVLCRHLNCGFAESIPKGGHFGRGSGPVWRDSFHC
DGTEAHLGECPVTALGASPCSHENDAAVICSGPARFASLRLVGGGSPCDGRVEIFQHGTW
GRVLDEQWDVQEASVVCRQLQCGEAEAAYNPPKAQRGTGPVGLRGVRCAGHEANLTLCNT
SLPESALEAGIAEDVGVVCWGSRQVRLVNGPGRCAGRVEIYYQGSWGSICDDGWDLSDAA
VVCHQLGCGGALEAVGSARFGEGSAQIWLESVNCSGAEAALWDCPAGSWGQHDCGHKEDA
GVVCSEFMALRLENGTNCSGCLQVFYNGTWGSVCSNSMTPETVSLACKELGCGDRGSLET
QRPYGRLSGTAWLDRVECGERNSSFWQCPSAPWHPQSCDDLREETHITCKDREKIRAVGG
EKGCSGRVEVWHRGSWGTVCDDSWDMRDAEVACRQLGCGPAVSALAEAAFGEGSGPIWLE
QVECRGTEPSLQDCWARPGDSGACRHKEDAAVNCSGTAVPRPGPVRLENGGGRCAGRVEV
KHQGQWGTVCDDSWDTNDAAVVCKQLGCGSAVKAHAEAYFGAGSGPIWMDDVNCHGTESA
LSDCRHNGWGQSNCYHSEDAGVTCSGFVRLVGGDNPCSGRVEIHDRNKWKTVCDSAFGLK
AADVVCRELQCGTALSVPGAAHFGEGAGPMWDRELQCVGNESLLSSCPTGSPRDQPCTHA
NAAGVTCTQFTGFRLVNGSTACEGRVEVHVXGTWGTLCASRWDLLDARVLCRHLNCGFAE
SIPKGGRFGRGTGPVWIDSFHSDGTEAHLGECPVTALGASPCSHENDAAVICSGPARFAS
LRLVGGGSPCDGRVEIFQHGTWGRVLDEQWEVQEASVVCRQLQCGEAEAAYNPPKAQRGT
GPVGLRGVRCAGHEANLTLCNTSLPESALEAGIAEDVGVVCWGSRQVRLVNGPGRCAGRV
EIYYQGSWGSVCDDDWDLSDAAVVCRQLGCGGALEAVGSARFGEGSAQIWLESVNCSGAE
AALWDCPAGSWGQHDCGHKDDAGVVCSEFMALRLENGTNCSGRLQVFYNGTWGSICSNSM
TPETVSLACKELGCGDRGSLETQRPYGRLSGTAWLDRVECGERNSSFWQCPSAPWHPQSC
DNLQEETHITCKGGQPETPPAPMAACPSTPSCTDREKIRAVGGEKGCSGRVEVWHRGSWG
TVCDDSWDMRDAEVACRQLGCGPAVSALAEAAFGEGSGPIWLEQVECRGTEPSLQDCWAR
PGDSGACRHKEDAAVNCSGLVLPFLCSCHADPTRGHLTGSGRVSLPVIMCIILGALVCLL
LALLAGQVRSARAGRRGSERAQEPFPEAVYEEIGSSPAWQKQARFSGSGWCASLVEDTST
VLFPLAATQG
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaggctggtgaatggcagcacggcgtgtgaggggagggtggaggtccatgtg
caggggacctggggcaccctctgtgcctcccgctgggacctcttggacgcccacgttctc
tgccgtcacctcaactgcgggtttgctgagtccattcctaaaggagggcattttgggaga
ggaagcggccctgtctggagagactccttccactgtgacgggactgaagcccacctggga
gagtgcccagtgactgccctgggggccttgccgtgctcccatgagaacgacgctgctgtc
atatgctcagctcgcttcgcatccctgcggctggtgggtggaggaagcccgtgcgacggg
cgagtggagatcttccagcacgggacgtggggcagagtcctggatgagcagtgggacgtg
caggaggccagcgtggtgtgccggcagctgcagtgtggagaggcagaggcagcctacaac
cccccgaaggctcagagagggacgggtcccgtggggctgcgcggggtgcggtgtgcaggg
cacgaggccaacctgaccctctgcaacacccccctgcctgagagtgcgctggaagcaggg
attgccgaggacgtgggggtcgtttgctgggggagccgtcaggtgcggctggtgaacggg
cctgggcgctgcgcggggagagtggagatctactaccagggcagctgggggagcgtctgc
gatgacggctgggacctgtctgatgctgccgtcgtttgccaccagctgggctgtggaggg
gcgctggaggcggttggctccgctcgcttcggggaaggctccgctcagatctggctggag
agcgtgaactgctccggggccgaagctgctctctgggactgcccggcagggtcctggggg
cagcacgactgcgggcacaaagaggacacaggagtcgtctgctcagagttcatggccctg
aggctggagaacggcaccaactgctccgggcgcctgcaggttttctacaatgggacgtgg
gggagcgtttgctccaactccatgactcctgaaactgtgtcgctggcatgcaaggagctg
ggctgcggggacagagggtccctggaaacacaacggccctacggcaggctgtctgtcacg
gcctggctggaccgtgtggagtgtggggagagaaacagctccttctggcagtgtccctcc
gctccctggcacccgcagtcatgcgacgacctgcgagaggagacccacatcacctgcaag
gggagtcagccagaaacgcccccggccccaatggctgcgtgccccagcaccccgagctgc
acagacagggagaagattcgtgccgtgggaggggagaaggggtgctctggccgagtggag
gtgtggcaccgcggctcctgggggacggtgtgtgacgactcttgggacatgcgggatgcc
gaggtggcatgcaggcagctgggctgtggccctgcggtgtctgccctggccgaggctgca
tttggggaggggagcggccccatctggctggagcaggtggagtgccgggggacagagcca
tctctgcaggactgctgggcccggcctggggacagcggtgcctgccgccataaggaggat
gcggccgtgaactgctcagagaccagcatggctgagttgggacctgtgaggctggaggat
ggcggcggacgctgtgctgggagagtggaggtgaaacaccagggccagtgggggactgtg
tgtgctttccactgggagatgaccaatgctgcagtggtttgtaagcagctgggctgtggg
tctgctgtccaagctcatgccaaagcagtctttgggccaggatctggccccatttggatg
gatttggtttactgtcatggcaatgagtctgccctgtctgactgtatacacagaggatgg
ggtaaacacaactgtgaccacagcgaggacgctggtgtgacgtgttcaggatttgtccgg
ctggttggaggggacaatccctgctcaggacgagtggagatccgtgataggaacaagtgg
aaaactgtctgtgactccgactttggtcccaaagctgccgacgtggtctgcagagagttg
cagtgtggcacagccctgtctgtccccggggcagctcactttggagaaggggctggtccc
atgtgggacagagagctgcagtgtgtggggaatgaatcccttctcagctcctgccccacg
gggtcccccagggagcagccctgcacccacgcgaatgctgccggtgtcacctgcacacgt
aaggactcagggcagggtgttaccaccgggggtctagatcaggttgctcagagccccgtt
aaacctgaccttgaatgtttgcctgcagccctaaaatggtgcagaaggaggagaaaggca
gggtgtccatttggcctctactccaccacccaaggcagcaaaagcacaagtctgccctgt
ctcatccttctctgtcccgagttcacagggttcaggctggtgaacggcagcacggcgtgt
gaggggagggtggaggtccatgtgcaggggacctggggcaccctctgtgcctcccgctgg
gacctcttggacgcccacgttctctgccgtcacctcaactgcgggtttgctgagtccatt
cctaaaggagggcattttgggagaggaagcggccctgtctggagagactccttccactgt
gacgggactgaagcccacctgggagagtgcccagtgactgccctgggggcctcgccgtgc
tcccatgagaacgacgctgctgtcatatgctcaggcccagctcgcttcgcatccctgcgg
ctggtgggtggaggaagcccgtgcgacgggcgagtggagatcttccagcacgggacgtgg
ggcagagtcctggatgagcagtgggacgtgcaggaggccagcgtggtgtgccggcagctg
cagtgcggagaggcagaggcagcctacaaccccccgaaggctcagagagggacgggtccc
gtggggctgcgcggggtgcggtgtgcagggcacgaggccaacctgaccctctgcaacacc
tccctgcctgagagtgcgctggaagcagggattgccgaggacgtgggggtcgtttgctgg
gggagccgtcaggtgcggctggtgaacgggcctgggcgctgcgcggggagagtggagatc
tactaccagggcagctgggggagcatctgcgatgacggctgggacctgtctgatgctgcc
gtcgtttgccaccagctgggctgcggaggggcgctggaggcggttggctccgctcgcttc
ggggaaggctccgctcagatctggctggagagcgtgaactgctccggggccgaagctgct
ctctgggactgcccggcagggtcctgggggcagcacgactgcgggcacaaagaggacgca
ggagtcgtctgctcagagttcatggccctgaggctggagaacggcaccaactgctccggg
tgcctgcaggttttctacaatgggacatgggggagcgtttgctccaactccatgactcct
gaaactgtgtcgctggcatgcaaggagctgggctgcggggacagagggtccctggaaaca
caacggccctacggcaggctgtctggcacggcctggctggatcgtgtggagtgtggggag
agaaacagctccttctggcagtgtccctccgctccctggcacccgcagtcatgtgacgac
ctgcgagaggagacccacatcacctgcaaggacagggagaagattcgtgccgtgggaggg
gagaaggggtgctccggccgagtggaggtgtggcaccgcggctcctgggggacggtgtgt
gacgactcttgggacatgcgggatgccgaggtggcatgcaggcagctgggctgtggccct
gcggtgtctgccctggccgaggctgcatttggggaggggagcggccccatctggctggag
caggtggagtgccgggggacagagccatctctgcaggactgctgggcccggcctggggac
agcggtgcctgccgccataaggaggacgcggccgtgaactgctcaggcaccgctgtcccc
aggccgggcccagtgaggctggagaatggcggcggacgctgtgctgggagagtggaggtg
aaacaccagggccagtgggggaccgtgtgtgatgactcctgggacacgaatgatgctgca
gtggtttgtaagcagctgggctgtgggtccgctgtcaaagctcatgctgaagcatacttt
ggggcaggatccggccccatttggatggatgatgttaattgtcacggcacagagtcggcc
ctgtctgactgtagacacaatggatggggccaaagcaactgttatcattctgaggatgct
ggagtgacatgctcaggatttgtccggctggttggaggggacaatccctgctcaggacga
gtggagatccatgataggaacaagtggaaaactgtctgtgactccgcctttggtctcaaa
gctgccgacgtggtctgcagagagttgcagtgtggcacagccctgtctgtccccggggca
gctcactttggagaaggggctggtcccatgtgggacagagagctgcagtgtgtggggaat
gaatcccttctcagctcctgccccacggggtcccccagggaccagccctgcacccacgcg
aatgctgctggtgtcacctgcacacagttcacagggttcaggctggtgaacggcagcacg
gcatgtgaggggagggtggaggtccatgtgtaggggacctggggcaccctctgtgcctcc
cgctgggatctcttggacgcccgcgttctctgccgtcacctcaactgcgggtttgctgag
tccattcctaaaggagggcgttttgggagaggaaccggccctgtctggatagactccttc
cactctgacggcactgaagcccacctgggagagtgcccagtgactgccctgggggcctcg
ccgtgctcccatgagaacgacgctgctgtcatatgctcaggcccagctcgcttcgcatcc
ctgcggctggtgggtggaggaagcccgtgcgacgggcgagtggagatcttccagcacggg
acgtggggcagagtcctggatgagcagtgggaggtgcaggaggccagcgtggtgtgccgg
cagctgcagtgcggagaggcagaggcagcctacaaccccccaaaggctcagagagggacg
ggtcccgtggggctgcgcggggtgcggtgtgcagggcacgaggccaacctgaccctctgc
aacacctccctgcctgagagtgcgctggaagcagggattgccgaagacgtgggggtcgtc
tgctgggggagccgtcaggtgcggctggtgaacgggcctgggcgctgcgctgggagagtg
gagatctactaccagggcagctgggggagcgtctgcgatgacgactgggacctgtctgat
gctgccgtcgtttgccgccagctgggctgcggaggggcgctggaggcagttggctccgct
cgcttcggggaaggctctgctcagatctggctggagagcgtgaactgctccggggccgaa
gctgctctctgggactgcccggcagggtcctgggggcagcacgactgtgggcacaaagat
gacgcaggagtcgtctgctcagagttcatggccctgaggctggagaacggcaccaactgc
tccgggcgcctgcaggttttctacaatgggacgtgggggagcatttgctccaactccatg
actcctgaaactgtgtcgctggcatgcaaggagctgggctgcggggacagagggtccctg
gaaacacaacggccctacggcaggctgtctggcacggcctggctggatcgtgtggagtgt
ggggagagaaacagctccttctggcagtgtccctccgctccctggcacccgcagtcatgt
gacaacctgcaagaggagacccacatcacctgcaaggggggtcagccagaaacgcccccg
gccccaatggctgcgtgccccagcaccccgagctgcacagacagggagaagattcgtgcc
gtgggaggggagaaggggtgctctggccgagtggaggtgtggcaccgcggctcctggggg
acggtgtgtgacgactcttgggacatgcgggatgccgaggtggcatgcaggcagctgggc
tgtggccctgcggtgtctgccctggctgaggctgcatttggggaggggagcggccccatc
tggctggagcaggtggagtgccgggggacagagccatctctgcaggactgctgggcccgg
cctggggacagcggtgcctgccgccataaggaggacgcggccgtgaactgctcaggcctg
gtgctgccctttctgtgttcctgccatgcagatcccacgcggggccatctgaccggcagt
gggagagtctcattgcccgtcatcatgtgcatcatcctgggagcccttgtctgcctgctc
ctggccctcctggccgggcaagtgcgaagcgccagggctgggcgcagaggctctgagaga
gctcaggagcccttccctgaggccgtgtacgaggagatcggttccagcccagcatggcag
aagcaggcaaggttcagcggctcaggttggtgtgcgtccctcgttgaggacacatctaca
gtgctctttcccctggctgccacgcagggttga
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