Rissa tridactyla (black-legged kittiwake): 128903524
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Entry
128903524 CDS
T09443
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128903524 (CASC3)
03015 mRNA surveillance pathway
128903524 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128903524 (CASC3)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128903524 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
128903524
NCBI-ProteinID:
XP_054043505
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAPRSRSASGSGSGSGSPRPPHRPPRGSAGA
LSAGPRSRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KMELKQDSNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADSTS
APPRNFTNRNSAGTGRMHPPRNYPRMGGYKETRPSYRTSEASVPHLSRNGEQAKQESNYR
AKRAEQTPPRDKSPEMEAAHVHSSPVKEEVALENQAMAADAAQPPPDRPVEKKSYSRARR
TRVKAGDAGKLADEVPASEGLTPVPPKPVQAETSPPPAKSSNWESPVESNLDGLEQEMTQ
MNLTEQNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPSPLPPQGMIVQPEMHLPHPGLHPH
QTPAPMANPGLYPPPVSMSPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKAKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggccgccagcgccccccgctcccgatccgcctccggttcc
ggatcgggatccggttccccccgcccgccccaccgcccgccgcggggctccgccggcgcc
ctcagcgctgggccgcggagccgcggggccgagagcgccgccgggggggcggccaagagc
gcgcccgagtccgagtgtgaaagcgaggatggcattgaaggagatgctgtactctcggat
tacgaaagcgcagaagactcagaggcagaagaggaggattacagcgaggaagaaagtgcc
aaaatggaactgaagcaggatagtaatgactcctgcgagtcagcggcaaaagcagagaaa
ggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagcggggatggg
caggagagcactgaacctgttgaaaataaagttgggaaaaaagttcccaagcacctggac
gacgatgaggatcgaaagaacccggcttacatcccacgcaaagggctcttcttcgagcac
gacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcagcgaaagctg
tggaaggatgagggccgctgggaacacgacaaattccgggaggacgagcaggcgcccaag
accaggcaggagctgatcgcgctttatggttatgacatcaggtcagctcacaaccccgac
gacatcaagccgaggaggatgcgcaaaccgcggtttgggagtcctcctcagcgagaccca
aactggtccaacgagaggccaaataagcccccaaggcaccaaggcgcagacagcacttcg
gctcccccgcgtaacttcaccaacaggaactcggcaggaacaggcaggatgcacccacct
aggaactacccgaggatggggggctacaaagagacccgtccaagctaccgaacttcggaa
gcaagcgtcccgcatctgtctcgaaacggcgagcaagctaaacaggagagcaactatcga
gcgaagcgcgcagagcaaaccccacccagagataagtcacctgagatggaagcggcgcat
gtccacagcagccctgtgaaggaggaggtcgctctggaaaaccaagccatggctgctgat
gctgcacagccaccgccagacagaccagtcgaaaagaagtcttattcccgggcaagaagg
accagagtcaaagctggggatgcagggaagctggcagatgaagtgcccgcttcagaaggg
ctgactcctgtgcctccaaaacctgtgcaagccgagacgtcgcccccaccagccaagagc
agtaactgggagtcgccagtagaatccaacttggatggactcgagcaagagatgacccaa
atgaatctcaccgagcagaactggactccggggcagtcgcagttcatacagccccgggag
ctgaggggtattcctaaccatatgcatgtgggaactgggccaccgcctcagtttaacagg
atggaggaaatggcggtgcaggggggccgcgtgaaacgctactcgtcgcagcggcagaga
ccgccggtgccggaacctgccccccccatgcacatcagcatcatggaagggcactactac
gacccactacaattccagggaccaatctacacccacagcgagaacccgtccccgctgccg
ccccaagggatgatcgtacagccagaaatgcacctccctcatccaggtttacatccccac
cagacaccagcccccatggcaaaccctggcctgtaccctccgcccgtctccatgtccccg
ggccagcccccgccgcagcagctgctagcgccgacttacttctcccctcctggagtcatg
aattttgggaatcctggctacccctaccccccaggagcgctcccccctccgccccctcct
catctctattccaacacgcaggcccagtcccaggtgtacggaggggtcacatactacaac
actgtccagcagcaagtgcagcccaagccttctccgcctcgaaggacgtcccagcctgtg
actatcaagccaccgcctccggaggacagcaaaggtgaaaaagcaaaggagaggagcaac
acgtag
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integrated database retrieval system
