Rissa tridactyla (black-legged kittiwake): 128903819
Help
Entry
128903819 CDS
T09443
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128903819 (DDX56)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128903819 (DDX56)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Helicases
128903819 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
128903819
NCBI-ProteinID:
XP_054043678
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAAAGNAAAGFEHMGLDPRLLRAVAELGWATPTAIQAEAIPLALEGRDLLARARTGSGKT
GAYGLPLLQHLLRAKEVAQAQAVRALVLVPSKELGQQVTRSLRELAAFCARALRVADLCA
HADLAAQRPVLMEKPDVVVGTPGRVLAHLGARNLSLRHSLELLVLDEADLLLSFGFGEDI
KALLCHLPRIYQALLVSATFSPEVEALRELVLHNPVTLCPPEPRLPDASRLRQFGVRCET
EEEKFLLLCALLKLRLLRGRALLFVSTLARCYRLKLFLEQFGVPACALNSQLPARSRCHV
ITQFNRGIYDYIVATDEEAPAVPPGQPPRKKRKGAAPSKGKDPEYSVARGIDFQNVAAVI
NFDVPPSVESYIHRVGRTARADNPGTALTFALPEEQDALARIEDALAGENGESMLQPYKF
SMEEIEGLRYRCRDAMRSVTKQAVKEARLREIKDELLNSEKLKVYFEDNPRDLHVLRHDK
PLHPAIVKPHLRNVPEYLVPRPQQPAAELQVRPPPPQAPDRAALLSPPPPRHPTDRAHPA
GGAPRPPQTAPTSGEGRGVSAPSPPRLCPIKVARDGMA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggaacgcggcggcggggttcgagcacatggggctggatccgcggctc
ctgcgggcggtggcggagctgggctgggccacccccaccgccatccaggccgaggccatt
cccctggcactggagggccgcgatctcttggcccgggccaggacgggctccgggaagacg
ggggcgtacgggctgcccctgctgcagcacctcctgcgcgccaaggaggtggcgcaggcc
caggcggtgcgggcgctggtgctggtgccctccaaggagctggggcagcaggtgacgcgc
agcctgcgggaactggccgccttctgcgcccgcgccctgcgcgtggccgacctctgcgcc
cacgccgacctcgccgcccagcggcccgtgctgatggagaagccggacgtggtggtgggc
acgccgggacgggtgctggcccacctgggcgcccgcaacctcagcctgcgccactcgctg
gagctgctggtgctggatgaggccgatctcctgctctccttcggcttcggggaggacatc
aaggccttgctgtgccacctgcccaggatctaccaggcgctgctggtgtcggccaccttc
agccccgaggtggaggcgctcagggagctggtgctgcacaacccggtgacgctgtgcccg
ccggaaccccgtttgcccgacgcctcgcggttacggcagttcggggtgcgctgcgagacg
gaggaggagaaattcctccttctctgcgccctcctcaagctgcgcctcctgcggggccgg
gccctgctttttgtctccactttggcccgctgttaccgcctcaaacttttcctggagcag
ttcggcgttcccgcctgcgccctcaactcccagctgcccgctcgctcccggtgccacgtc
atcacccagttcaaccggggcatctacgactacatcgtggccaccgacgaggaggcgccg
gccgtgcccccggggcaacccccccgcaagaagcgcaagggggccgctcccagcaagggc
aaggacccggagtacagcgtggcgcggggcatcgacttccagaacgtggccgccgtcatc
aacttcgacgtgccgccctccgtcgagtcctacatccaccgcgtgggccggacggcccgc
gccgacaaccccggcacggcgctcaccttcgcgctgcccgaggagcaggacgcgctggcc
cgcatcgaggacgcgctggcaggagagaatggcgagtccatgctgcagccctacaagttc
tccatggaggagatcgagggactgcgctaccgctgccgggacgccatgcgctccgtcacc
aagcaggcggtgaaggaagcccggctgcgggagatcaaggacgagctgctcaactccgaa
aaactcaaggtttacttcgaggacaacccccgcgacctgcacgtcctgcgccacgacaag
cccctgcaccccgccatcgtcaaacctcacctccgcaacgtccccgagtacctggtcccg
cggccccagcaacccgctgcagaacttcaagttcgcccgccaccgccccaagcgcccgac
cgcgccgccctcctgagccccccccccccccggcaccccacggaccgtgcccaccctgcg
gggggggcaccgcggccacctcaaaccgcccccacctctggcgagggacggggtgtctcc
gcgccgtcccccccgcggctgtgcccaataaaggtggcaagggacggcatggcgtga
DBGET
integrated database retrieval system
