Rissa tridactyla (black-legged kittiwake): 128903849
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Entry
128903849 CDS
T09443
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128903849 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128903849 (SPTBN4)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128903849 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
128903849 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CH_2
MG280
SLATT_6
Motif
Other DBs
NCBI-GeneID:
128903849
NCBI-ProteinID:
XP_054043716
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MAAAEVATMEQQNNNWEGPEPRGWDDPKLFECSRIKALAEERDAVQKKTFTKWVNAHLAR
VSCRIGDLYADLRDGYVLTRLLEVLSGEQLPKPTRGRMRIHSLENVDKALQFLKEQRVHL
ENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWCQMKTAGY
PEVNIQNFTTSWRDGLAFNALIHKHRPDLIDFHKLTKSNATYNLQQAFNTAEQQLGLSKL
LDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAMEIEAIIERYEAL
AAELLAWIQHTIAIIGNQKFANSLTGVQQQLQAFTAFCTLEKPVKFQEKGNLEVLLFTIQ
SKLRANNRKLYVPSEGKSISDINKAWTCLEKAEHEREVALRNELIRQEKLELLAQRFDHK
AVMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVVVELALEMES
EGYYDTKRISAQKDNILRQWGLLTELVCARRARLEQNLALQKIFQEMVYMIDWMEEMQVL
LVSKDLGKHLLEVEDLLQKHGLLEADISAQTERVQALNAAALKFSELEGYQPCDPQIICN
RVNHVQTCLEELGELAGKRRKELEDSRQLWAFFQEMEEAEAWIREKEQILAAKTCGRDLS
SVLTLTNKHKSMLGELGSRRALLHQTMKRGEQILAKKRFSPGGIQEKMREVRLRWKKLEE
VTGLHQQRLQEALNFFQFSAETDDLVAWLQDTYRIVSSDDFGHDDYSTQALLRKHRAVVE
EVEKHRAAVLALRKQLALLAPEHRQGVDVQIRVVEVEQLYGEVAEVAVLRQQWLQDALAV
YRMFSEVHACEVWVDEKEQWLERMEVPEELDEVEVVQHRFESLDQEMNSVMGRILDVNQV
VQQLVDGGHPSSEEVRSCQDHLNSRWNRVVELVERKKSQLSSVLKIQNYLLECSEMKAQV
REKRKAIEATQSGSGDLGGVLALQRRLSTMEAALVVLEPRLVELQQEGEALAASHPGRAL
EILLPFEQISEEWEALKRALQGCEDSLTIAGRLQQFIQDLDNFLGWLVKTQAAVACQEVP
DSLSEAERLLNHHAALKEEINGYEEDYAKIQAASDLLALEEMEVPYLSLQQWLQKLDAGW
GKLLQSWETRREVLVQSHVFHLFLRDVQQCQTSLYNQESALVHAELPDTVEGVTNAIKKH
KDFTTTMELNLQKIQQTLQAGESLQRQGNLYSDRVAQEMEGLRTKSHRNYELAQEWMQRL
KDHLELQRFLQNCRE
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggtggccaccatggagcagcagaacaacaactgggaagggcccgag
ccccggggctgggacgaccccaagctcttcgagtgctcccgcatcaaggctttggccgag
gagcgggacgcggtgcagaagaagaccttcaccaagtgggtgaacgcccacctggcccgt
gtctcctgccgcatcggggacctctatgccgacctgcgcgacggctacgtcctcacccgc
ctgctggaggtgctctccggggagcaactgcccaagccgacgcggggccggatgcggatc
cactccttggagaacgtggacaaggcattgcagttcctcaaggagcaacgggtccacctg
gagaacgtgggctcccacgacatcgtggatggcaaccaccgtctcaccctcggcctcatc
tggaccatcatcctccgcttccagatccaggtgatcaagatcaagaccgaagacaaccgg
gagacgcgttcggccaaggacgctcttctgctctggtgccagatgaagacggcaggctac
cccgaggtgaacatccagaacttcaccaccagctggagggatgggttggccttcaacgcg
ctcatccacaagcacaggccggacctcatcgacttccacaagttgaccaagtccaacgca
acctacaaccttcaacaagccttcaacacggccgagcagcagctggggctcagcaagctg
ctggaccccgaggacgtcaacatggaggaccccgatgagaagtccatcatcacctacgtg
gtgtccttctaccactacttctccaagatgaaggcgctagcggtggaggggaagcgcatc
gggaaggttctggatcaagccatggagatcgaggccatcatcgagcggtacgaggcgctg
gcagccgagctgctggcctggatccagcacaccatcgccatcatcggcaaccagaagttc
gccaactccctcaccggggtccagcagcagctccaagccttcaccgccttctgcaccctg
gagaaacctgtcaagttccaggagaaggggaacctggaggtcctgctcttcaccatccag
agcaaactccgggccaacaaccgcaaactctatgtccccagcgagggcaagagcatctct
gacatcaacaaggcttggacctgcttggagaaggcagagcatgagcgggaggtggcgttg
cgcaacgagttgatccggcaggagaagctggagctgttggcccaacgttttgaccacaag
gctgtcatgagagagacgtggctgaacgagaaccaacgcctggtctcccaggacaacttt
ggctacgacctgccggcggtggaggccgccatgaagaagcacgaggccatcgaggccgac
atctcctcctaccaagagcgcatccaagtggtggtggagctggccctggagatggagtcc
gagggctactacgacaccaaacgcatcagcgcccagaaggacaacatcctgcggcagtgg
gggctcttgaccgaactggtctgcgcccgccgtgcccgtctggagcagaacttagcccta
cagaagatcttccaggagatggtctatatgattgactggatggaggagatgcaggtgttg
ctggtctccaaggatttggggaagcatcttctggaggttgaggacctgctgcagaagcac
gggctgctggaggccgacatctccgcccagactgagcgggtgcaggccctcaacgccgct
gcgctcaagttctccgagctggagggctaccaaccctgtgacccccagatcatctgcaac
cgggtcaaccacgtccagacctgcctggaggaactgggggaactggcgggcaagagacgc
aaggaactggaggactctcgccagctctgggccttctttcaggagatggaggaggccgag
gcatggatccgtgagaaggagcagatcttggccgccaagacgtgcggccgggacctgagc
agcgtcttgaccttgaccaacaagcacaagagcatgctgggcgaactgggcagccgccgg
gcgctcttgcaccagaccatgaagaggggcgagcagatcttggccaagaaacgcttcagc
cccggtgggatccaggagaagatgcgggaggttcgcctccgctggaagaagctggaggag
gtgacggggttgcaccaacagcggttgcaggaggccctcaacttcttccagttcagcgcc
gagacggacgacttggtggcctggttgcaggacacctaccgcatcgtctccagcgatgac
tttggccatgatgactattccacccaagctcttctgcggaagcaccgggcggtggtggaa
gaggtggagaagcaccgggcggccgtcttggcccttcggaagcagttggctcttctggca
cccgaacaccgtcaaggggttgacgtgcagatccgggtggtggaggtggagcagctctac
ggggaggtggccgaggtggccgtcctacggcagcagtggttgcaggatgccttggccgtc
taccgtatgttcagcgaggtccacgcctgcgaggtctgggtggatgagaaggagcagtgg
ttggagaggatggaggtgccggaggagctggatgaggttgaggtggtccaacataggttt
gagagcctggaccaggagatgaacagcgtcatgggacggatcctggatgtcaaccaggtg
gtgcagcagttggtggatgggggccaccccagctcggaggaggtccgctcctgccaggac
cacctcaacagcaggtggaaccgggtggtggagctggtggaacgcaagaagagccaactc
agctccgtcctgaagatccagaactacctgctggagtgcagtgagatgaaggcgcaggtg
cgggagaagagaaaagccatcgaagccacgcaatcgggcagcggcgacctgggcggcgtc
ttggccttgcaacgtcgcctctccaccatggaggccgctttggtggtcttggaacctcgg
ttggtggagcttcaacaggaaggcgaagctttggccgcctcccaccctgggagggccctg
gagatcctgctgcccttcgagcagatcagcgaagagtgggaggccctcaagagggcgctc
caaggttgcgaggactctttgaccatcgccggccgcttgcaacagttcatccaagacttg
gacaacttcctcggttggttggtgaagacccaagcggccgttgcttgccaggaggtgccc
gatagcttgagcgaagccgagaggttgctgaaccaccacgcggccctcaaggaggaaatc
aacggctacgaggaggactacgccaagatccaagcggccagcgacctcctggccttggag
gagatggaggtgccctacctctccttgcagcagtggttgcagaagctggacgcgggttgg
ggcaagttgttgcagagctgggagacgcggcgggaggtgctggtgcaatcgcacgtcttc
cacctcttcctgcgggacgtccaacaatgccagaccagcctctacaaccaggagtccgcc
ctggtccacgccgagctgcccgacacggtggaaggggtcaccaacgccatcaagaagcac
aaggacttcaccaccaccatggagctcaacctgcagaagatccaacagaccctccaagcc
ggcgagagcctccaacggcagggcaacctctacagcgaccgcgtggcccaggagatggag
gggcttcgcaccaagagccaccgcaactacgagctggcccaggagtggatgcagcggctc
aaggaccatctggagctccagcggttcctccagaactgccgggag
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